Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Defa-ps1-201ENSMUST00000119062 282 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm14069-201ENSMUST00000120815 229 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm14600-201ENSMUST00000121032 630 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm12327-201ENSMUST00000121729 1168 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Defa-ps6-201ENSMUST00000122172 282 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm24240-201ENSMUST00000157785 135 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm25981-201ENSMUST00000157921 295 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm25519-201ENSMUST00000158392 127 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm7346-201ENSMUST00000169661 476 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Mir3112-201ENSMUST00000175431 82 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm23816-201ENSMUST00000179617 132 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm27330-201ENSMUST00000184689 132 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm28802-201ENSMUST00000188624 944 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm37097-201ENSMUST00000193676 336 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm38076-201ENSMUST00000193889 450 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm43659-201ENSMUST00000200894 628 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm44634-201ENSMUST00000206119 152 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm3565-201ENSMUST00000222670 609 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Zmym2-202ENSMUST00000223669 1281 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 AC124562.1-201ENSMUST00000224673 337 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 AC137871.2-201ENSMUST00000226482 289 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 AC166369.1-201ENSMUST00000228126 351 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm5265-201ENSMUST00000076828 342 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm22043-201ENSMUST00000082993 158 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Gm44562-201ENSMUST00000207194 1347 ntBASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
RTRAFQ9CQE8 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm24119-201ENSMUST00000103979 246 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm23273-201ENSMUST00000104058 135 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm15783-201ENSMUST00000117521 633 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm13076-201ENSMUST00000118041 204 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm14647-201ENSMUST00000119392 680 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm15480-201ENSMUST00000120442 519 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm14982-201ENSMUST00000121102 442 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm25945-201ENSMUST00000122484 135 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm15279-201ENSMUST00000155593 288 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm26349-201ENSMUST00000157530 130 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm27999-201ENSMUST00000183539 193 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Npn2-202ENSMUST00000189275 235 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm19891-201ENSMUST00000189771 303 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm37002-201ENSMUST00000194560 373 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm9632-201ENSMUST00000195934 643 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm17951-201ENSMUST00000198536 496 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm43407-201ENSMUST00000199816 317 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm44274-201ENSMUST00000203417 256 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm18410-201ENSMUST00000207199 577 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm20948-201ENSMUST00000211091 449 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Olfr936-202ENSMUST00000216912 937 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm8681-201ENSMUST00000219115 618 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm5655-201ENSMUST00000221078 901 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 AC154515.2-201ENSMUST00000226093 406 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 AC154598.1-201ENSMUST00000227079 347 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 Gm42479-201ENSMUST00000198654 1356 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 AC104897.1-201ENSMUST00000222638 3628 ntBASIC2.35□□□□□ -2.03
RTRAFQ9CQE8 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.34□□□□□ -2.03
RTRAFQ9CQE8 Gm22493-201ENSMUST00000104494 132 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms