Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC3.82□□□□□ -1.8
Msh4Q99MT2 Gm29495-201ENSMUST00000189319 664 ntBASIC3.82□□□□□ -1.8
Msh4Q99MT2 Gm37119-201ENSMUST00000195691 389 ntBASIC3.82□□□□□ -1.8
Msh4Q99MT2 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.82□□□□□ -1.8
Msh4Q99MT2 Gm4644-201ENSMUST00000197587 400 ntBASIC3.82□□□□□ -1.8
Msh4Q99MT2 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.82□□□□□ -1.8
Msh4Q99MT2 Gm43441-201ENSMUST00000201458 205 ntBASIC3.82□□□□□ -1.8
Msh4Q99MT2 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Msh4Q99MT2 Gm35876-201ENSMUST00000205044 459 ntBASIC3.82□□□□□ -1.8
Msh4Q99MT2 Gm19126-201ENSMUST00000207896 509 ntBASIC3.82□□□□□ -1.8
Msh4Q99MT2 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
Msh4Q99MT2 Gm6929-201ENSMUST00000210930 468 ntBASIC3.82□□□□□ -1.8
Msh4Q99MT2 AL669916.3-201ENSMUST00000213855 94 ntBASIC3.82□□□□□ -1.8
Msh4Q99MT2 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.82□□□□□ -1.8
Msh4Q99MT2 AL669916.6-201ENSMUST00000214610 94 ntBASIC3.82□□□□□ -1.8
Msh4Q99MT2 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.82□□□□□ -1.8
Msh4Q99MT2 AL669916.4-201ENSMUST00000215976 94 ntBASIC3.82□□□□□ -1.8
Msh4Q99MT2 AL669916.1-201ENSMUST00000217640 94 ntBASIC3.82□□□□□ -1.8
Msh4Q99MT2 Gm18507-201ENSMUST00000218855 525 ntBASIC3.82□□□□□ -1.8
Msh4Q99MT2 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.82□□□□□ -1.8
Msh4Q99MT2 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.82□□□□□ -1.8
Msh4Q99MT2 AC139350.4-201ENSMUST00000228483 798 ntBASIC3.82□□□□□ -1.8
Msh4Q99MT2 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Msh4Q99MT2 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Msh4Q99MT2 Gm22423-201ENSMUST00000082861 184 ntBASIC3.82□□□□□ -1.8
Msh4Q99MT2 Snord38a-201ENSMUST00000083746 71 ntBASIC3.82□□□□□ -1.8
Msh4Q99MT2 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Msh4Q99MT2 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Msh4Q99MT2 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Msh4Q99MT2 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Msh4Q99MT2 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Msh4Q99MT2 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Msh4Q99MT2 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Msh4Q99MT2 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Msh4Q99MT2 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Msh4Q99MT2 Gm14816-201ENSMUST00000117174 294 ntBASIC3.81□□□□□ -1.8
Msh4Q99MT2 Gm14037-201ENSMUST00000120576 313 ntBASIC3.81□□□□□ -1.8
Msh4Q99MT2 Gm22986-201ENSMUST00000122753 130 ntBASIC3.81□□□□□ -1.8
Msh4Q99MT2 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Msh4Q99MT2 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC3.81□□□□□ -1.8
Msh4Q99MT2 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC3.81□□□□□ -1.8
Msh4Q99MT2 Gm7909-201ENSMUST00000182688 614 ntBASIC3.81□□□□□ -1.8
Msh4Q99MT2 Gm27313-201ENSMUST00000183500 142 ntBASIC3.81□□□□□ -1.8
Msh4Q99MT2 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.81□□□□□ -1.8
Msh4Q99MT2 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC3.81□□□□□ -1.8
Msh4Q99MT2 Gm28598-201ENSMUST00000186490 615 ntBASIC3.81□□□□□ -1.8
Msh4Q99MT2 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.81□□□□□ -1.8
Msh4Q99MT2 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC3.81□□□□□ -1.8
Msh4Q99MT2 Gm29268-201ENSMUST00000188669 615 ntBASIC3.81□□□□□ -1.8
Msh4Q99MT2 Gm28151-201ENSMUST00000189404 951 ntBASIC3.81□□□□□ -1.8
Msh4Q99MT2 Gm29218-205ENSMUST00000190846 615 ntBASIC3.81□□□□□ -1.8
Msh4Q99MT2 Gm28267-201ENSMUST00000191093 265 ntBASIC3.81□□□□□ -1.8
Msh4Q99MT2 Gm28978-201ENSMUST00000191120 615 ntBASIC3.81□□□□□ -1.8
Msh4Q99MT2 Gm37172-201ENSMUST00000191926 615 ntBASIC3.81□□□□□ -1.8
Msh4Q99MT2 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.81□□□□□ -1.8
Msh4Q99MT2 Gm19243-201ENSMUST00000198592 269 ntBASIC3.81□□□□□ -1.8
Msh4Q99MT2 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.81□□□□□ -1.8
Msh4Q99MT2 Gm18672-201ENSMUST00000208035 270 ntBASIC3.81□□□□□ -1.8
Msh4Q99MT2 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.81□□□□□ -1.8
Msh4Q99MT2 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC3.81□□□□□ -1.8
Msh4Q99MT2 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.81□□□□□ -1.8
Msh4Q99MT2 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Msh4Q99MT2 Gm25859-201ENSMUST00000083710 91 ntBASIC3.81□□□□□ -1.8
Msh4Q99MT2 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Msh4Q99MT2 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Msh4Q99MT2 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Msh4Q99MT2 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Msh4Q99MT2 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Msh4Q99MT2 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Msh4Q99MT2 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
Msh4Q99MT2 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Msh4Q99MT2 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Msh4Q99MT2 Gm24281-201ENSMUST00000104234 136 ntBASIC3.8□□□□□ -1.8
Msh4Q99MT2 Gm13268-201ENSMUST00000117485 433 ntBASIC3.8□□□□□ -1.8
Msh4Q99MT2 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.8□□□□□ -1.8
Msh4Q99MT2 Gm14656-201ENSMUST00000120342 502 ntBASIC3.8□□□□□ -1.8
Msh4Q99MT2 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.8□□□□□ -1.8
Msh4Q99MT2 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.8□□□□□ -1.8
Msh4Q99MT2 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Msh4Q99MT2 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Msh4Q99MT2 Gm25559-201ENSMUST00000157182 74 ntBASIC3.8□□□□□ -1.8
Msh4Q99MT2 Gm26028-201ENSMUST00000158660 294 ntBASIC3.8□□□□□ -1.8
Msh4Q99MT2 Mir1251-201ENSMUST00000175486 84 ntBASIC3.8□□□□□ -1.8
Msh4Q99MT2 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.8□□□□□ -1.8
Msh4Q99MT2 Gm27028-201ENSMUST00000182303 399 ntBASIC3.8□□□□□ -1.8
Msh4Q99MT2 Gm27718-201ENSMUST00000183721 86 ntBASIC3.8□□□□□ -1.8
Msh4Q99MT2 Gm5116-201ENSMUST00000187732 463 ntBASIC3.8□□□□□ -1.8
Msh4Q99MT2 Gm29627-201ENSMUST00000187984 463 ntBASIC3.8□□□□□ -1.8
Msh4Q99MT2 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Msh4Q99MT2 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Msh4Q99MT2 Gm28211-201ENSMUST00000190920 315 ntBASIC3.8□□□□□ -1.8
Msh4Q99MT2 Gm37692-201ENSMUST00000192633 232 ntBASIC3.8□□□□□ -1.8
Msh4Q99MT2 Gm38329-201ENSMUST00000193473 427 ntBASIC3.8□□□□□ -1.8
Msh4Q99MT2 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC3.8□□□□□ -1.8
Msh4Q99MT2 Gm8942-201ENSMUST00000217892 400 ntBASIC3.8□□□□□ -1.8
Msh4Q99MT2 Gm19441-201ENSMUST00000221545 330 ntBASIC3.8□□□□□ -1.8
Msh4Q99MT2 AC173482.2-201ENSMUST00000224044 750 ntBASIC3.8□□□□□ -1.8
Msh4Q99MT2 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.8□□□□□ -1.8
Msh4Q99MT2 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Msh4Q99MT2 Gm9762-201ENSMUST00000036976 444 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms