Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 AC090496.1-201ENSMUST00000226020 260 ntBASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 AC153964.1-201ENSMUST00000219677 3142 ntBASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Gm5248-201ENSMUST00000186108 4046 ntBASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 Gm13550-201ENSMUST00000118185 525 ntBASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 Gm11813-201ENSMUST00000118586 291 ntBASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 Gm23463-201ENSMUST00000122468 99 ntBASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 Gm25965-201ENSMUST00000157170 93 ntBASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 Gm23959-201ENSMUST00000157208 324 ntBASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 Gm44485-201ENSMUST00000199569 137 ntBASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 Gm43914-201ENSMUST00000203592 594 ntBASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 Gm45730-201ENSMUST00000212560 395 ntBASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 Gm10042-201ENSMUST00000079884 78 ntBASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 Gm25401-201ENSMUST00000082975 106 ntBASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 n-R5s160-201ENSMUST00000083096 120 ntBASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 Gm26165-201ENSMUST00000083791 138 ntBASIC5.65□□□□□ -1.5
Chmp7Q8R1T1 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Chmp7Q8R1T1 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Chmp7Q8R1T1 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Chmp7Q8R1T1 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Chmp7Q8R1T1 CT030170.3-201ENSMUST00000221205 1815 ntBASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Mir5624-201ENSMUST00000176635 61 ntBASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Gm24713-201ENSMUST00000178850 107 ntBASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Gm25448-201ENSMUST00000180065 107 ntBASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Gm8790-201ENSMUST00000194108 322 ntBASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Gm3010-201ENSMUST00000198805 448 ntBASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Gm17779-201ENSMUST00000213395 394 ntBASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 AC239878.1-201ENSMUST00000224212 506 ntBASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 AC133189.2-201ENSMUST00000228527 392 ntBASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Gm23412-201ENSMUST00000083017 107 ntBASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Gm25937-201ENSMUST00000083912 107 ntBASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Chmp7Q8R1T1 AC153969.1-201ENSMUST00000214047 2605 ntBASIC5.63□□□□□ -1.51
Chmp7Q8R1T1 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Chmp7Q8R1T1 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.63□□□□□ -1.51
Chmp7Q8R1T1 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Chmp7Q8R1T1 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Chmp7Q8R1T1 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Chmp7Q8R1T1 Gm14622-201ENSMUST00000117117 468 ntBASIC5.63□□□□□ -1.51
Chmp7Q8R1T1 Gm13737-201ENSMUST00000119793 232 ntBASIC5.63□□□□□ -1.51
Chmp7Q8R1T1 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Chmp7Q8R1T1 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC5.63□□□□□ -1.51
Chmp7Q8R1T1 Gm22816-201ENSMUST00000157450 117 ntBASIC5.63□□□□□ -1.51
Chmp7Q8R1T1 Gm26354-201ENSMUST00000158221 129 ntBASIC5.63□□□□□ -1.51
Chmp7Q8R1T1 Gm3191-201ENSMUST00000167139 346 ntBASIC5.63□□□□□ -1.51
Chmp7Q8R1T1 Gm27402-201ENSMUST00000183890 120 ntBASIC5.63□□□□□ -1.51
Chmp7Q8R1T1 Gm29428-201ENSMUST00000190086 409 ntBASIC5.63□□□□□ -1.51
Chmp7Q8R1T1 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5.63□□□□□ -1.51
Chmp7Q8R1T1 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Chmp7Q8R1T1 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Chmp7Q8R1T1 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
Chmp7Q8R1T1 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
Chmp7Q8R1T1 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Chmp7Q8R1T1 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Chmp7Q8R1T1 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.62□□□□□ -1.51
Chmp7Q8R1T1 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Chmp7Q8R1T1 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Chmp7Q8R1T1 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Chmp7Q8R1T1 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.62□□□□□ -1.51
Chmp7Q8R1T1 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Chmp7Q8R1T1 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Chmp7Q8R1T1 Gm15195-201ENSMUST00000118775 263 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms