Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 n-R5s192-201ENSMUST00000122577 119 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm22073-201ENSMUST00000122668 189 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm5263-201ENSMUST00000163646 601 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm5258-201ENSMUST00000165437 327 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm20923-201ENSMUST00000190009 319 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm21088-201ENSMUST00000190875 316 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm37616-201ENSMUST00000193974 322 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm44389-201ENSMUST00000203795 182 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm44055-201ENSMUST00000204376 247 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm44858-201ENSMUST00000207360 154 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm45387-201ENSMUST00000209792 632 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm6012-201ENSMUST00000210821 730 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC4.19□□□□□ -1.74
Clrn1Q8K445 AC159203.2-201ENSMUST00000221326 193 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 CT009718.4-201ENSMUST00000221881 109 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Olfr575-201ENSMUST00000084812 957 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm14390-201ENSMUST00000117505 1695 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Clrn1Q8K445 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
Clrn1Q8K445 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.18□□□□□ -1.74
Clrn1Q8K445 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.18□□□□□ -1.74
Clrn1Q8K445 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Clrn1Q8K445 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm12760-201ENSMUST00000117861 482 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm12924-201ENSMUST00000121747 318 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm8880-201ENSMUST00000121800 454 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm23213-201ENSMUST00000122715 313 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.18□□□□□ -1.74
Clrn1Q8K445 Zakit-201ENSMUST00000157677 308 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm23542-201ENSMUST00000158208 96 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm24636-201ENSMUST00000158673 288 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm16545-201ENSMUST00000161968 463 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm22951-201ENSMUST00000179471 107 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm26622-201ENSMUST00000180520 298 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm27387-201ENSMUST00000184583 116 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm28660-201ENSMUST00000186496 253 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm28625-201ENSMUST00000188309 205 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm28717-201ENSMUST00000189950 315 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm37601-201ENSMUST00000194922 394 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Clrn1Q8K445 Trav15n-3-201ENSMUST00000200498 168 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm6051-201ENSMUST00000201529 352 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm44879-201ENSMUST00000207007 503 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Clrn1Q8K445 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.18□□□□□ -1.74
Clrn1Q8K445 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm10916-201ENSMUST00000080330 483 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Clrn1Q8K445 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Clrn1Q8K445 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm15095-201ENSMUST00000118996 1430 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Clrn1Q8K445 AC121844.2-201ENSMUST00000219067 2066 ntBASIC4.18□□□□□ -1.74
Clrn1Q8K445 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.18□□□□□ -1.74
Clrn1Q8K445 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Clrn1Q8K445 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Clrn1Q8K445 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.17□□□□□ -1.74
Clrn1Q8K445 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Clrn1Q8K445 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Clrn1Q8K445 AC133076.2-201ENSMUST00000227678 3532 ntBASIC4.17□□□□□ -1.74
Clrn1Q8K445 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Clrn1Q8K445 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Clrn1Q8K445 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.17□□□□□ -1.74
Clrn1Q8K445 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Clrn1Q8K445 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Clrn1Q8K445 Gm15084-201ENSMUST00000178585 1502 ntBASIC4.17□□□□□ -1.74
Clrn1Q8K445 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.17□□□□□ -1.74
Clrn1Q8K445 Gm23577-201ENSMUST00000103950 110 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms