Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm43604-201ENSMUST00000199799 705 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm45226-201ENSMUST00000206602 288 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm18016-201ENSMUST00000216119 801 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm5175-202ENSMUST00000219699 529 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm22739-201ENSMUST00000083437 160 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm14981-201ENSMUST00000117325 943 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm9850-201ENSMUST00000117916 227 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm12954-201ENSMUST00000118610 611 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm7429-201ENSMUST00000118664 348 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm13064-201ENSMUST00000119125 557 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm12433-201ENSMUST00000119659 255 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm11357-201ENSMUST00000119758 954 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm16005-201ENSMUST00000120515 269 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm14982-201ENSMUST00000121102 442 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm15038-201ENSMUST00000122144 296 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm22034-201ENSMUST00000157283 134 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm23671-201ENSMUST00000157472 103 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm28010-201ENSMUST00000179485 126 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm23379-201ENSMUST00000180026 107 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm27236-201ENSMUST00000184147 442 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Mir6401-201ENSMUST00000184499 109 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm27308-201ENSMUST00000184807 233 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm8296-201ENSMUST00000185597 524 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm38261-201ENSMUST00000192608 316 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm43214-201ENSMUST00000199242 352 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 AC156560.1-201ENSMUST00000221425 256 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 AC154245.1-201ENSMUST00000224615 601 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 AC129208.2-201ENSMUST00000228506 320 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Gm23516-201ENSMUST00000093728 107 ntBASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Ccdc28bQ8CEG5 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm23481-201ENSMUST00000104173 131 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm11488-201ENSMUST00000117277 863 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm11393-201ENSMUST00000118019 288 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm9119-201ENSMUST00000118866 495 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm14607-201ENSMUST00000119119 491 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm23023-201ENSMUST00000158767 109 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm25999-201ENSMUST00000175398 133 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm18396-201ENSMUST00000177095 361 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm22395-201ENSMUST00000177427 96 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm25874-201ENSMUST00000178030 79 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Trbv8-201ENSMUST00000194020 285 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm19620-201ENSMUST00000195972 434 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm43556-201ENSMUST00000196186 681 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm18100-201ENSMUST00000200897 452 ntBASIC3.34□□□□□ -1.87
Ccdc28bQ8CEG5 Gm44990-201ENSMUST00000203922 217 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms