Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Usp47Q8BY87 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Usp47Q8BY87 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Usp47Q8BY87 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Usp47Q8BY87 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC3.31□□□□□ -1.88
Usp47Q8BY87 Gm23441-201ENSMUST00000157268 127 ntBASIC3.31□□□□□ -1.88
Usp47Q8BY87 Gm24532-201ENSMUST00000157951 286 ntBASIC3.31□□□□□ -1.88
Usp47Q8BY87 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC3.31□□□□□ -1.88
Usp47Q8BY87 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Usp47Q8BY87 Gm27718-201ENSMUST00000183721 86 ntBASIC3.31□□□□□ -1.88
Usp47Q8BY87 Gm28399-201ENSMUST00000186221 318 ntBASIC3.31□□□□□ -1.88
Usp47Q8BY87 Gm28572-201ENSMUST00000187444 318 ntBASIC3.31□□□□□ -1.88
Usp47Q8BY87 Gm29365-201ENSMUST00000189461 699 ntBASIC3.31□□□□□ -1.88
Usp47Q8BY87 Gm29525-201ENSMUST00000189844 699 ntBASIC3.31□□□□□ -1.88
Usp47Q8BY87 Gm29524-201ENSMUST00000190819 699 ntBASIC3.31□□□□□ -1.88
Usp47Q8BY87 Gm29523-201ENSMUST00000191415 699 ntBASIC3.31□□□□□ -1.88
Usp47Q8BY87 Gm37946-201ENSMUST00000192064 347 ntBASIC3.31□□□□□ -1.88
Usp47Q8BY87 Gm17893-201ENSMUST00000203017 770 ntBASIC3.31□□□□□ -1.88
Usp47Q8BY87 Gm44092-201ENSMUST00000204470 258 ntBASIC3.31□□□□□ -1.88
Usp47Q8BY87 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC3.31□□□□□ -1.88
Usp47Q8BY87 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.31□□□□□ -1.88
Usp47Q8BY87 AC150560.3-201ENSMUST00000227442 455 ntBASIC3.31□□□□□ -1.88
Usp47Q8BY87 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Usp47Q8BY87 Gm43753-201ENSMUST00000196539 3309 ntBASIC3.31□□□□□ -1.88
Usp47Q8BY87 Gm13366-201ENSMUST00000122198 970 ntBASIC3.3□□□□□ -1.88
Usp47Q8BY87 Gm22264-201ENSMUST00000178200 107 ntBASIC3.3□□□□□ -1.88
Usp47Q8BY87 Mir7226-201ENSMUST00000184953 60 ntBASIC3.3□□□□□ -1.88
Usp47Q8BY87 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Usp47Q8BY87 Gm44477-201ENSMUST00000199661 110 ntBASIC3.3□□□□□ -1.88
Usp47Q8BY87 Gm8679-201ENSMUST00000210651 1036 ntBASIC3.3□□□□□ -1.88
Usp47Q8BY87 Gm18000-201ENSMUST00000212153 800 ntBASIC3.3□□□□□ -1.88
Usp47Q8BY87 AC129017.1-201ENSMUST00000228363 270 ntBASIC3.3□□□□□ -1.88
Usp47Q8BY87 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Usp47Q8BY87 Gm23407-201ENSMUST00000082538 91 ntBASIC3.3□□□□□ -1.88
Usp47Q8BY87 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Usp47Q8BY87 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Usp47Q8BY87 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
Usp47Q8BY87 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Usp47Q8BY87 AC115891.1-201ENSMUST00000215798 1755 ntBASIC3.3□□□□□ -1.88
Usp47Q8BY87 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC3.29□□□□□ -1.88
Usp47Q8BY87 Gm45178-201ENSMUST00000207744 4110 ntBASIC3.29□□□□□ -1.88
Usp47Q8BY87 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Usp47Q8BY87 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Usp47Q8BY87 Gm14579-201ENSMUST00000117068 283 ntBASIC3.29□□□□□ -1.88
Usp47Q8BY87 Gm12401-201ENSMUST00000118435 228 ntBASIC3.29□□□□□ -1.88
Usp47Q8BY87 Gm38041-201ENSMUST00000194445 661 ntBASIC3.29□□□□□ -1.88
Usp47Q8BY87 Gm19253-201ENSMUST00000204279 307 ntBASIC3.29□□□□□ -1.88
Usp47Q8BY87 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.29□□□□□ -1.88
Usp47Q8BY87 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC3.29□□□□□ -1.88
Usp47Q8BY87 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.29□□□□□ -1.88
Usp47Q8BY87 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Usp47Q8BY87 Gm23460-201ENSMUST00000083258 109 ntBASIC3.29□□□□□ -1.88
Usp47Q8BY87 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Usp47Q8BY87 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.29□□□□□ -1.88
Usp47Q8BY87 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Usp47Q8BY87 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
Usp47Q8BY87 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Usp47Q8BY87 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Usp47Q8BY87 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.28□□□□□ -1.88
Usp47Q8BY87 Gm9850-201ENSMUST00000117916 227 ntBASIC3.28□□□□□ -1.88
Usp47Q8BY87 Gm5384-201ENSMUST00000120313 463 ntBASIC3.28□□□□□ -1.88
Usp47Q8BY87 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC3.28□□□□□ -1.88
Usp47Q8BY87 Gm23980-201ENSMUST00000157135 158 ntBASIC3.28□□□□□ -1.88
Usp47Q8BY87 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Usp47Q8BY87 Gm17711-201ENSMUST00000172028 237 ntBASIC3.28□□□□□ -1.88
Usp47Q8BY87 Gm26622-201ENSMUST00000180520 298 ntBASIC3.28□□□□□ -1.88
Usp47Q8BY87 Gm27427-201ENSMUST00000185134 193 ntBASIC3.28□□□□□ -1.88
Usp47Q8BY87 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Usp47Q8BY87 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
Usp47Q8BY87 Gm42482-201ENSMUST00000198904 1947 ntBASIC3.28□□□□□ -1.88
Usp47Q8BY87 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
Usp47Q8BY87 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Usp47Q8BY87 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Usp47Q8BY87 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Usp47Q8BY87 Gm22257-201ENSMUST00000158687 301 ntBASIC3.27□□□□□ -1.89
Usp47Q8BY87 Gm17153-201ENSMUST00000171314 490 ntBASIC3.27□□□□□ -1.89
Usp47Q8BY87 Gm37377-201ENSMUST00000191733 304 ntBASIC3.27□□□□□ -1.89
Usp47Q8BY87 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.27□□□□□ -1.89
Usp47Q8BY87 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Usp47Q8BY87 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Usp47Q8BY87 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Usp47Q8BY87 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Usp47Q8BY87 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Usp47Q8BY87 BC051076-202ENSMUST00000199477 2868 ntBASIC3.27□□□□□ -1.89
Usp47Q8BY87 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Usp47Q8BY87 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Usp47Q8BY87 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.26□□□□□ -1.89
Usp47Q8BY87 Gm13433-201ENSMUST00000121701 240 ntBASIC3.26□□□□□ -1.89
Usp47Q8BY87 Gm8338-201ENSMUST00000163928 363 ntBASIC3.26□□□□□ -1.89
Usp47Q8BY87 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.26□□□□□ -1.89
Usp47Q8BY87 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Usp47Q8BY87 Gm22646-201ENSMUST00000175130 115 ntBASIC3.26□□□□□ -1.89
Usp47Q8BY87 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC3.26□□□□□ -1.89
Usp47Q8BY87 Gm43804-201ENSMUST00000198280 456 ntBASIC3.26□□□□□ -1.89
Usp47Q8BY87 Gm44059-201ENSMUST00000204048 351 ntBASIC3.26□□□□□ -1.89
Usp47Q8BY87 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Usp47Q8BY87 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.26□□□□□ -1.89
Usp47Q8BY87 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC3.26□□□□□ -1.89
Usp47Q8BY87 Gm18899-201ENSMUST00000217663 546 ntBASIC3.26□□□□□ -1.89
Usp47Q8BY87 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms