Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.46□□□□□ -1.54
Usp40Q8BWR4 AC121997.2-203ENSMUST00000228613 4192 ntBASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm43594-201ENSMUST00000201153 3442 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Usp40Q8BWR4 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm23578-201ENSMUST00000103943 104 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm11566-201ENSMUST00000118550 203 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm12235-201ENSMUST00000118596 170 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm14980-201ENSMUST00000121247 736 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Snora81-201ENSMUST00000157310 178 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm23350-201ENSMUST00000158429 103 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm24875-201ENSMUST00000158888 104 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm10105-201ENSMUST00000184601 270 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm27385-201ENSMUST00000184747 104 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm28390-201ENSMUST00000185212 700 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm28974-201ENSMUST00000187893 231 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm18429-201ENSMUST00000198707 421 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm43415-201ENSMUST00000201934 750 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm44870-201ENSMUST00000207291 357 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
Usp40Q8BWR4 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC5.45□□□□□ -1.54
Usp40Q8BWR4 CT010506.2-201ENSMUST00000225618 183 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 AC127371.1-201ENSMUST00000228516 312 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm23927-201ENSMUST00000082466 215 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm23518-201ENSMUST00000082835 153 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm24446-201ENSMUST00000083982 156 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm10222-201ENSMUST00000088336 294 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Usp40Q8BWR4 AC167420.1-201ENSMUST00000222999 2121 ntBASIC5.45□□□□□ -1.54
Usp40Q8BWR4 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Usp40Q8BWR4 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Usp40Q8BWR4 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Gm12787-201ENSMUST00000119234 396 ntBASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Gm17421-201ENSMUST00000167845 674 ntBASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Mir5128-201ENSMUST00000175217 84 ntBASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Gm22852-201ENSMUST00000177899 101 ntBASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Gm21809-201ENSMUST00000178495 468 ntBASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Gm17412-201ENSMUST00000179261 468 ntBASIC5.44□□□□□ -1.54
Usp40Q8BWR4 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Gm26988-201ENSMUST00000183296 945 ntBASIC5.44□□□□□ -1.54
Usp40Q8BWR4 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Gm37239-201ENSMUST00000193510 141 ntBASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC5.44□□□□□ -1.54
Usp40Q8BWR4 AC139638.1-201ENSMUST00000218027 364 ntBASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC5.44□□□□□ -1.54
Usp40Q8BWR4 AC133517.1-202ENSMUST00000224409 233 ntBASIC5.44□□□□□ -1.54
Usp40Q8BWR4 AC166095.1-203ENSMUST00000224591 233 ntBASIC5.44□□□□□ -1.54
Usp40Q8BWR4 AC161572.1-201ENSMUST00000227486 640 ntBASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Gm24316-201ENSMUST00000083041 107 ntBASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Mir215-201ENSMUST00000083628 112 ntBASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Usp40Q8BWR4 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Usp40Q8BWR4 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Gm24067-201ENSMUST00000104514 85 ntBASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Gm12379-201ENSMUST00000119607 391 ntBASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Mup-ps21-201ENSMUST00000119998 448 ntBASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Gm14564-201ENSMUST00000122159 294 ntBASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Gm24014-201ENSMUST00000157728 157 ntBASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Gm22851-201ENSMUST00000178741 94 ntBASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Mir6385-201ENSMUST00000184295 105 ntBASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Gm42758-201ENSMUST00000202146 283 ntBASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Gm44475-201ENSMUST00000204041 424 ntBASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms