Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Gm14681-201ENSMUST00000118047 411 ntBASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Mir1934-201ENSMUST00000158127 83 ntBASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Gm23473-201ENSMUST00000158883 116 ntBASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Gm26960-201ENSMUST00000182263 412 ntBASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Gm26988-201ENSMUST00000183296 945 ntBASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Gm27599-201ENSMUST00000183758 174 ntBASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Gm28650-201ENSMUST00000188413 411 ntBASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Gm7142-201ENSMUST00000194232 586 ntBASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Gm42828-201ENSMUST00000199669 469 ntBASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Gm44927-201ENSMUST00000207573 716 ntBASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Gm18585-201ENSMUST00000215197 556 ntBASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Gm19786-201ENSMUST00000222589 580 ntBASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Ccdc40Q8BI79 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Gm23530-201ENSMUST00000104564 137 ntBASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Gm7429-201ENSMUST00000118664 348 ntBASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Gm4916-201ENSMUST00000126139 642 ntBASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Gm14562-201ENSMUST00000129885 543 ntBASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Gm16274-201ENSMUST00000139251 592 ntBASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Gm22225-201ENSMUST00000157358 278 ntBASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Gm44058-201ENSMUST00000204335 467 ntBASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Gm39147-201ENSMUST00000211376 465 ntBASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Gm9309-201ENSMUST00000223537 546 ntBASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Gm25792-201ENSMUST00000083289 100 ntBASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Ccdc40Q8BI79 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Gm7974-201ENSMUST00000117154 408 ntBASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Gm14879-201ENSMUST00000117308 507 ntBASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Gm11356-201ENSMUST00000118974 192 ntBASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Gm14804-201ENSMUST00000122322 508 ntBASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Gm24505-201ENSMUST00000157682 126 ntBASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Gm25519-201ENSMUST00000158392 127 ntBASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Gm27342-201ENSMUST00000183530 109 ntBASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Gm45080-201ENSMUST00000206648 283 ntBASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Gm45105-201ENSMUST00000207824 397 ntBASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Olfr936-202ENSMUST00000216912 937 ntBASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 AC157017.2-201ENSMUST00000218354 777 ntBASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Gm21007-201ENSMUST00000221024 326 ntBASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Gm19540-201ENSMUST00000221843 810 ntBASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Mir101b-201ENSMUST00000083622 97 ntBASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.38□□□□□ -1.87
Ccdc40Q8BI79 Gm9496-201ENSMUST00000191295 1601 ntBASIC3.37□□□□□ -1.87
Ccdc40Q8BI79 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ccdc40Q8BI79 Gm25420-201ENSMUST00000104216 127 ntBASIC3.37□□□□□ -1.87
Ccdc40Q8BI79 Gm13076-201ENSMUST00000118041 204 ntBASIC3.37□□□□□ -1.87
Ccdc40Q8BI79 Gm23754-201ENSMUST00000157576 63 ntBASIC3.37□□□□□ -1.87
Ccdc40Q8BI79 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC3.37□□□□□ -1.87
Ccdc40Q8BI79 Gm27161-201ENSMUST00000183960 562 ntBASIC3.37□□□□□ -1.87
Ccdc40Q8BI79 Gm29259-201ENSMUST00000186396 694 ntBASIC3.37□□□□□ -1.87
Ccdc40Q8BI79 Gm18667-201ENSMUST00000186523 484 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 329.7 ms