Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm27718-201ENSMUST00000183721 86 ntBASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 Gm44449-201ENSMUST00000203610 153 ntBASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 Gm45658-201ENSMUST00000209197 580 ntBASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 Gm35857-201ENSMUST00000212739 178 ntBASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 Gm46146-201ENSMUST00000217483 346 ntBASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 AC166358.6-201ENSMUST00000221834 1206 ntBASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 AC164597.2-201ENSMUST00000226738 603 ntBASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 Gm24921-201ENSMUST00000083024 107 ntBASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 Gm23297-201ENSMUST00000083184 127 ntBASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC3.61□□□□□ -1.83
Hmgb4Q6P8W9 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm11219-201ENSMUST00000118565 358 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm14566-201ENSMUST00000118915 321 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm13743-201ENSMUST00000121486 724 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm24936-201ENSMUST00000122598 247 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm12226-201ENSMUST00000144172 876 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm17177-201ENSMUST00000169144 483 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm28623-201ENSMUST00000187219 192 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm37576-201ENSMUST00000194228 372 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm37575-201ENSMUST00000195467 309 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm39147-201ENSMUST00000211376 465 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm5358-201ENSMUST00000212814 353 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 AC157570.3-201ENSMUST00000219281 205 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm31849-201ENSMUST00000220306 375 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm18388-201ENSMUST00000222339 557 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 AC161758.1-201ENSMUST00000226123 310 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm4987-201ENSMUST00000078326 408 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm10237-201ENSMUST00000078393 273 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm25008-201ENSMUST00000083809 81 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.6□□□□□ -1.83
Hmgb4Q6P8W9 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm26145-201ENSMUST00000104476 127 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm22091-201ENSMUST00000116908 127 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm2318-201ENSMUST00000119623 639 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm2768-201ENSMUST00000121062 250 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm22107-201ENSMUST00000122548 100 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm26171-201ENSMUST00000158422 131 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm7438-201ENSMUST00000177664 639 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm7408-201ENSMUST00000178014 639 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm7386-201ENSMUST00000178020 639 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm3657-201ENSMUST00000178170 639 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm7415-201ENSMUST00000178205 639 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm7398-201ENSMUST00000178589 639 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm7391-201ENSMUST00000178680 639 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm7375-201ENSMUST00000179232 639 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm24968-201ENSMUST00000179817 107 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm3681-201ENSMUST00000179940 639 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm23648-201ENSMUST00000180301 107 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm27477-201ENSMUST00000184649 143 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm37866-201ENSMUST00000191950 696 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm42509-201ENSMUST00000197390 781 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm42621-201ENSMUST00000198114 275 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm44076-201ENSMUST00000203072 520 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm34701-202ENSMUST00000204685 360 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm17838-201ENSMUST00000205872 876 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm9712-201ENSMUST00000210842 311 ntBASIC3.59□□□□□ -1.83
Hmgb4Q6P8W9 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms