Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm24736-201ENSMUST00000158862 130 ntBASIC1.88□□□□□ -2.11
Col7a1Q63870 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
Col7a1Q63870 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Col7a1Q63870 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Col7a1Q63870 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Col7a1Q63870 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
Col7a1Q63870 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC1.88□□□□□ -2.11
Col7a1Q63870 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Col7a1Q63870 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Col7a1Q63870 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Col7a1Q63870 Gm12706-201ENSMUST00000121588 698 ntBASIC1.88□□□□□ -2.11
Col7a1Q63870 Gm36298-201ENSMUST00000223394 1732 ntBASIC1.88□□□□□ -2.11
Col7a1Q63870 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Col7a1Q63870 Gm45558-201ENSMUST00000209384 1895 ntBASIC1.88□□□□□ -2.11
Col7a1Q63870 Gm8989-201ENSMUST00000184782 7275 ntBASIC1.88□□□□□ -2.11
Col7a1Q63870 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
Col7a1Q63870 Gm15846-201ENSMUST00000116022 320 ntBASIC1.87□□□□□ -2.11
Col7a1Q63870 Gm11430-201ENSMUST00000121317 217 ntBASIC1.87□□□□□ -2.11
Col7a1Q63870 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Col7a1Q63870 Gm19252-201ENSMUST00000204705 305 ntBASIC1.87□□□□□ -2.11
Col7a1Q63870 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Col7a1Q63870 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Col7a1Q63870 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Col7a1Q63870 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Col7a1Q63870 Gm24930-201ENSMUST00000158315 83 ntBASIC1.87□□□□□ -2.11
Col7a1Q63870 Gm25831-201ENSMUST00000158924 163 ntBASIC1.87□□□□□ -2.11
Col7a1Q63870 Mir7679-201ENSMUST00000183379 63 ntBASIC1.87□□□□□ -2.11
Col7a1Q63870 Gm27326-201ENSMUST00000183504 95 ntBASIC1.87□□□□□ -2.11
Col7a1Q63870 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC1.87□□□□□ -2.11
Col7a1Q63870 Gm19457-201ENSMUST00000200995 448 ntBASIC1.87□□□□□ -2.11
Col7a1Q63870 Gm2691-201ENSMUST00000203205 901 ntBASIC1.87□□□□□ -2.11
Col7a1Q63870 Gm18997-201ENSMUST00000216353 822 ntBASIC1.87□□□□□ -2.11
Col7a1Q63870 AC130536.1-201ENSMUST00000224425 271 ntBASIC1.87□□□□□ -2.11
Col7a1Q63870 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Col7a1Q63870 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC1.87□□□□□ -2.11
Col7a1Q63870 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC1.87□□□□□ -2.11
Col7a1Q63870 Gm26915-201ENSMUST00000183080 748 ntBASIC1.87□□□□□ -2.11
Col7a1Q63870 Gm28744-201ENSMUST00000189939 340 ntBASIC1.87□□□□□ -2.11
Col7a1Q63870 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
Col7a1Q63870 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Col7a1Q63870 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Col7a1Q63870 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC1.86□□□□□ -2.11
Col7a1Q63870 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Col7a1Q63870 Gm45033-201ENSMUST00000206710 3167 ntBASIC1.86□□□□□ -2.11
Col7a1Q63870 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.86□□□□□ -2.11
Col7a1Q63870 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
Col7a1Q63870 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Col7a1Q63870 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Col7a1Q63870 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Col7a1Q63870 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Col7a1Q63870 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Col7a1Q63870 Gm38311-201ENSMUST00000192945 165 ntBASIC1.86□□□□□ -2.11
Col7a1Q63870 Gm44476-201ENSMUST00000196225 91 ntBASIC1.86□□□□□ -2.11
Col7a1Q63870 AC154224.1-201ENSMUST00000224367 403 ntBASIC1.86□□□□□ -2.11
Col7a1Q63870 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Col7a1Q63870 Gm25699-201ENSMUST00000082896 167 ntBASIC1.86□□□□□ -2.11
Col7a1Q63870 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC1.86□□□□□ -2.11
Col7a1Q63870 Gm6195-201ENSMUST00000063059 357 ntBASIC1.85□□□□□ -2.11
Col7a1Q63870 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Col7a1Q63870 Gm9314-201ENSMUST00000199881 1528 ntBASIC1.85□□□□□ -2.11
Col7a1Q63870 Gm26301-201ENSMUST00000104813 95 ntBASIC1.85□□□□□ -2.11
Col7a1Q63870 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC1.85□□□□□ -2.11
Col7a1Q63870 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC1.85□□□□□ -2.11
Col7a1Q63870 Mir1946a-201ENSMUST00000158360 134 ntBASIC1.85□□□□□ -2.11
Col7a1Q63870 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC1.85□□□□□ -2.11
Col7a1Q63870 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.85□□□□□ -2.11
Col7a1Q63870 AC129323.1-201ENSMUST00000216733 470 ntBASIC1.85□□□□□ -2.11
Col7a1Q63870 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC1.85□□□□□ -2.11
Col7a1Q63870 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.85□□□□□ -2.11
Col7a1Q63870 Mir448-201ENSMUST00000083516 112 ntBASIC1.85□□□□□ -2.11
Col7a1Q63870 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Col7a1Q63870 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
Col7a1Q63870 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
Col7a1Q63870 Gm2878-201ENSMUST00000170173 486 ntBASIC1.84□□□□□ -2.11
Col7a1Q63870 Gm44521-201ENSMUST00000206469 217 ntBASIC1.84□□□□□ -2.11
Col7a1Q63870 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Col7a1Q63870 Gm3623-201ENSMUST00000173643 2747 ntBASIC1.84□□□□□ -2.11
Col7a1Q63870 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Col7a1Q63870 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Col7a1Q63870 Gm8151-201ENSMUST00000184817 871 ntBASIC1.84□□□□□ -2.11
Col7a1Q63870 Gm38330-201ENSMUST00000192743 959 ntBASIC1.84□□□□□ -2.11
Col7a1Q63870 AC161250.1-201ENSMUST00000213426 1111 ntBASIC1.84□□□□□ -2.11
Col7a1Q63870 AC153532.1-201ENSMUST00000218126 1111 ntBASIC1.84□□□□□ -2.11
Col7a1Q63870 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Col7a1Q63870 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Col7a1Q63870 Gm24098-201ENSMUST00000102075 109 ntBASIC1.84□□□□□ -2.12
Col7a1Q63870 Gm25381-201ENSMUST00000102078 109 ntBASIC1.84□□□□□ -2.12
Col7a1Q63870 Gm25090-201ENSMUST00000104000 132 ntBASIC1.84□□□□□ -2.12
Col7a1Q63870 Gm12432-201ENSMUST00000119540 186 ntBASIC1.84□□□□□ -2.12
Col7a1Q63870 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.84□□□□□ -2.12
Col7a1Q63870 Gm23902-201ENSMUST00000157571 134 ntBASIC1.84□□□□□ -2.12
Col7a1Q63870 Ear-ps12-201ENSMUST00000161720 451 ntBASIC1.84□□□□□ -2.12
Col7a1Q63870 Gm20997-201ENSMUST00000205148 231 ntBASIC1.84□□□□□ -2.12
Col7a1Q63870 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC1.83□□□□□ -2.12
Col7a1Q63870 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Col7a1Q63870 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Col7a1Q63870 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Col7a1Q63870 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Col7a1Q63870 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Col7a1Q63870 Gm8430-201ENSMUST00000119780 471 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms