Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trim58Q5NCC9 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trim58Q5NCC9 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.61□□□□□ -1.83
Trim58Q5NCC9 Gm43104-201ENSMUST00000197234 311 ntBASIC3.61□□□□□ -1.83
Trim58Q5NCC9 Gm43975-201ENSMUST00000203023 481 ntBASIC3.61□□□□□ -1.83
Trim58Q5NCC9 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC3.61□□□□□ -1.83
Trim58Q5NCC9 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC3.61□□□□□ -1.83
Trim58Q5NCC9 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC3.61□□□□□ -1.83
Trim58Q5NCC9 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.61□□□□□ -1.83
Trim58Q5NCC9 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
Trim58Q5NCC9 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trim58Q5NCC9 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.61□□□□□ -1.83
Trim58Q5NCC9 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.61□□□□□ -1.83
Trim58Q5NCC9 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm23911-201ENSMUST00000104596 134 ntBASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm13349-201ENSMUST00000118436 411 ntBASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC3.6□□□□□ -1.83
Trim58Q5NCC9 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm25555-201ENSMUST00000158078 111 ntBASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm24734-201ENSMUST00000158860 262 ntBASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm15974-201ENSMUST00000159103 531 ntBASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm2930-201ENSMUST00000170403 474 ntBASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm43214-201ENSMUST00000199242 352 ntBASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm44061-201ENSMUST00000203962 1195 ntBASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm45382-201ENSMUST00000210607 151 ntBASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm45588-201ENSMUST00000211213 630 ntBASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC3.6□□□□□ -1.83
Trim58Q5NCC9 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim58Q5NCC9 Gm7648-201ENSMUST00000173036 1658 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Gm14142-201ENSMUST00000117833 296 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Gm11253-201ENSMUST00000118486 201 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Gm6071-201ENSMUST00000119561 440 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Gm25102-201ENSMUST00000122479 112 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Gm24787-201ENSMUST00000157380 123 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Gm18416-201ENSMUST00000175635 1003 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Gm20648-201ENSMUST00000175815 328 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Gm25360-201ENSMUST00000178786 191 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Gm6501-201ENSMUST00000187178 916 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Gm38281-201ENSMUST00000192301 315 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Gm43217-201ENSMUST00000199513 367 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC3.59□□□□□ -1.83
Trim58Q5NCC9 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Gm45965-201ENSMUST00000221192 1284 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.59□□□□□ -1.83
Trim58Q5NCC9 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Gm2544-201ENSMUST00000222702 756 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.59□□□□□ -1.83
Trim58Q5NCC9 AC150560.3-201ENSMUST00000227442 455 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Gm23452-201ENSMUST00000083327 107 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Gm24254-201ENSMUST00000083702 104 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC3.59□□□□□ -1.83
Trim58Q5NCC9 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Trim58Q5NCC9 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trim58Q5NCC9 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.58□□□□□ -1.84
Trim58Q5NCC9 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.58□□□□□ -1.84
Trim58Q5NCC9 Gm14973-201ENSMUST00000117248 255 ntBASIC3.58□□□□□ -1.84
Trim58Q5NCC9 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trim58Q5NCC9 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.58□□□□□ -1.84
Trim58Q5NCC9 Gm24443-201ENSMUST00000157242 132 ntBASIC3.58□□□□□ -1.84
Trim58Q5NCC9 Gm23865-201ENSMUST00000157723 97 ntBASIC3.58□□□□□ -1.84
Trim58Q5NCC9 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.58□□□□□ -1.84
Trim58Q5NCC9 Gm25470-201ENSMUST00000175576 111 ntBASIC3.58□□□□□ -1.84
Trim58Q5NCC9 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trim58Q5NCC9 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC3.58□□□□□ -1.84
Trim58Q5NCC9 Gm38154-201ENSMUST00000195444 340 ntBASIC3.58□□□□□ -1.84
Trim58Q5NCC9 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.58□□□□□ -1.84
Trim58Q5NCC9 Gm18327-201ENSMUST00000202426 830 ntBASIC3.58□□□□□ -1.84
Trim58Q5NCC9 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC3.58□□□□□ -1.84
Trim58Q5NCC9 Gm18557-201ENSMUST00000218710 433 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 140.6 ms