Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Trim41Q5NCC3 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC8.72□□□□□ -1.01
Trim41Q5NCC3 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim41Q5NCC3 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim41Q5NCC3 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim41Q5NCC3 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC8.72□□□□□ -1.01
Trim41Q5NCC3 Gm12156-201ENSMUST00000119188 554 ntBASIC8.72□□□□□ -1.01
Trim41Q5NCC3 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC8.72□□□□□ -1.01
Trim41Q5NCC3 Gm25834-201ENSMUST00000158916 101 ntBASIC8.72□□□□□ -1.01
Trim41Q5NCC3 Gm16125-201ENSMUST00000159003 339 ntBASIC8.72□□□□□ -1.01
Trim41Q5NCC3 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim41Q5NCC3 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim41Q5NCC3 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC8.72□□□□□ -1.01
Trim41Q5NCC3 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Trim41Q5NCC3 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
Trim41Q5NCC3 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC8.72□□□□□ -1.01
Trim41Q5NCC3 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Trim41Q5NCC3 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim41Q5NCC3 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Trim41Q5NCC3 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Trim41Q5NCC3 Gm5746-201ENSMUST00000183550 2200 ntBASIC8.72□□□□□ -1.01
Trim41Q5NCC3 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim41Q5NCC3 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC8.72□□□□□ -1.01
Trim41Q5NCC3 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trim41Q5NCC3 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trim41Q5NCC3 Gm38253-201ENSMUST00000194058 4678 ntBASIC8.71□□□□□ -1.01
Trim41Q5NCC3 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC8.71□□□□□ -1.01
Trim41Q5NCC3 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trim41Q5NCC3 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trim41Q5NCC3 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Trim41Q5NCC3 Gm12423-201ENSMUST00000118334 135 ntBASIC8.71□□□□□ -1.02
Trim41Q5NCC3 Gm25103-201ENSMUST00000122671 318 ntBASIC8.71□□□□□ -1.02
Trim41Q5NCC3 n-R5s21-201ENSMUST00000122692 117 ntBASIC8.71□□□□□ -1.02
Trim41Q5NCC3 Gm26219-201ENSMUST00000175216 71 ntBASIC8.71□□□□□ -1.02
Trim41Q5NCC3 Gm27285-201ENSMUST00000183875 127 ntBASIC8.71□□□□□ -1.02
Trim41Q5NCC3 Gm27545-201ENSMUST00000184755 202 ntBASIC8.71□□□□□ -1.02
Trim41Q5NCC3 Gm5002-201ENSMUST00000207145 223 ntBASIC8.71□□□□□ -1.02
Trim41Q5NCC3 AC153794.2-201ENSMUST00000222650 550 ntBASIC8.71□□□□□ -1.02
Trim41Q5NCC3 AC241593.1-201ENSMUST00000224768 397 ntBASIC8.71□□□□□ -1.02
Trim41Q5NCC3 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Trim41Q5NCC3 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim41Q5NCC3 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim41Q5NCC3 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim41Q5NCC3 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim41Q5NCC3 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC8.71□□□□□ -1.02
Trim41Q5NCC3 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim41Q5NCC3 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim41Q5NCC3 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim41Q5NCC3 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim41Q5NCC3 Gm42876-201ENSMUST00000196989 3215 ntBASIC8.71□□□□□ -1.02
Trim41Q5NCC3 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Trim41Q5NCC3 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim41Q5NCC3 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC8.71□□□□□ -1.02
Trim41Q5NCC3 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC8.71□□□□□ -1.02
Trim41Q5NCC3 Gm4759-201ENSMUST00000183414 6622 ntBASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Gm43283-201ENSMUST00000199138 2548 ntBASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Gm11576-201ENSMUST00000117433 417 ntBASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Gm11490-201ENSMUST00000118128 272 ntBASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Gm15162-201ENSMUST00000119325 283 ntBASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Gm12118-201ENSMUST00000119766 532 ntBASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Gm24630-201ENSMUST00000122768 106 ntBASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Gm24505-201ENSMUST00000157682 126 ntBASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Gm25486-201ENSMUST00000158726 63 ntBASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Gm16545-201ENSMUST00000161968 463 ntBASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Gm27465-201ENSMUST00000184290 91 ntBASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Gm27818-201ENSMUST00000184536 159 ntBASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Gm29352-201ENSMUST00000188054 544 ntBASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Gm42855-201ENSMUST00000197388 253 ntBASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC8.7□□□□□ -1.02
Trim41Q5NCC3 AC124772.1-201ENSMUST00000221325 151 ntBASIC8.7□□□□□ -1.02
Trim41Q5NCC3 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Gm37767-201ENSMUST00000193239 1834 ntBASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Trim41Q5NCC3 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Trim41Q5NCC3 AC115047.2-201ENSMUST00000214421 1848 ntBASIC8.69□□□□□ -1.02
Trim41Q5NCC3 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Gm7853-201ENSMUST00000100708 478 ntBASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Gm11698-201ENSMUST00000117948 455 ntBASIC8.69□□□□□ -1.02
Trim41Q5NCC3 n-R5s80-201ENSMUST00000122596 111 ntBASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Gm29657-201ENSMUST00000189807 342 ntBASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Trbv11-201ENSMUST00000194354 260 ntBASIC8.69□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 108.5 ms