Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Usp28Q5I043 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Usp28Q5I043 Gm2348-201ENSMUST00000108782 300 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 Gm14879-201ENSMUST00000117308 507 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 Gm12954-201ENSMUST00000118610 611 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 Gm11625-201ENSMUST00000119535 296 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 Gm14577-201ENSMUST00000121134 256 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 Gm13511-201ENSMUST00000121167 363 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.12□□□□□ -1.91
Usp28Q5I043 Gm24787-201ENSMUST00000157380 123 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Usp28Q5I043 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 Mir6975-201ENSMUST00000184879 61 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.12□□□□□ -1.91
Usp28Q5I043 Gm37431-201ENSMUST00000195102 111 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.12□□□□□ -1.91
Usp28Q5I043 Gm43979-201ENSMUST00000203179 475 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 Gm44208-201ENSMUST00000205199 421 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 Gm45696-201ENSMUST00000212088 985 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.12□□□□□ -1.91
Usp28Q5I043 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC3.12□□□□□ -1.91
Usp28Q5I043 AC163664.1-201ENSMUST00000226251 1248 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Usp28Q5I043 Gm9818-201ENSMUST00000050900 255 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Usp28Q5I043 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Usp28Q5I043 Gm26458-201ENSMUST00000082832 128 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Usp28Q5I043 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Usp28Q5I043 Gm38278-201ENSMUST00000194715 1365 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 Gm42852-201ENSMUST00000202649 1379 ntBASIC3.12□□□□□ -1.91
Usp28Q5I043 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Usp28Q5I043 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Usp28Q5I043 Gm23431-201ENSMUST00000104006 107 ntBASIC3.11□□□□□ -1.91
Usp28Q5I043 Gm6429-201ENSMUST00000117144 475 ntBASIC3.11□□□□□ -1.91
Usp28Q5I043 Gm14973-201ENSMUST00000117248 255 ntBASIC3.11□□□□□ -1.91
Usp28Q5I043 Gm9850-201ENSMUST00000117916 227 ntBASIC3.11□□□□□ -1.91
Usp28Q5I043 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC3.11□□□□□ -1.91
Usp28Q5I043 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.11□□□□□ -1.91
Usp28Q5I043 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC3.11□□□□□ -1.91
Usp28Q5I043 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.11□□□□□ -1.91
Usp28Q5I043 Gm25555-201ENSMUST00000158078 111 ntBASIC3.11□□□□□ -1.91
Usp28Q5I043 Gm16236-201ENSMUST00000159588 379 ntBASIC3.11□□□□□ -1.91
Usp28Q5I043 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Usp28Q5I043 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.11□□□□□ -1.91
Usp28Q5I043 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.11□□□□□ -1.91
Usp28Q5I043 Gm24082-201ENSMUST00000175175 83 ntBASIC3.11□□□□□ -1.91
Usp28Q5I043 Gm25412-201ENSMUST00000180258 107 ntBASIC3.11□□□□□ -1.91
Usp28Q5I043 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC3.11□□□□□ -1.91
Usp28Q5I043 Gm29460-201ENSMUST00000188607 714 ntBASIC3.11□□□□□ -1.91
Usp28Q5I043 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.11□□□□□ -1.91
Usp28Q5I043 Mir703-201ENSMUST00000197105 109 ntBASIC3.11□□□□□ -1.91
Usp28Q5I043 Gm43493-201ENSMUST00000199837 202 ntBASIC3.11□□□□□ -1.91
Usp28Q5I043 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.11□□□□□ -1.91
Usp28Q5I043 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Usp28Q5I043 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC3.11□□□□□ -1.91
Usp28Q5I043 Gm17911-201ENSMUST00000210806 877 ntBASIC3.11□□□□□ -1.91
Usp28Q5I043 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.11□□□□□ -1.91
Usp28Q5I043 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC3.11□□□□□ -1.91
Usp28Q5I043 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Usp28Q5I043 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.11□□□□□ -1.91
Usp28Q5I043 AC113031.2-201ENSMUST00000226132 579 ntBASIC3.11□□□□□ -1.91
Usp28Q5I043 AC121960.3-201ENSMUST00000227077 623 ntBASIC3.11□□□□□ -1.91
Usp28Q5I043 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Usp28Q5I043 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC3.11□□□□□ -1.91
Usp28Q5I043 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Usp28Q5I043 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Usp28Q5I043 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.11□□□□□ -1.91
Usp28Q5I043 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.1□□□□□ -1.91
Usp28Q5I043 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Usp28Q5I043 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Usp28Q5I043 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.1□□□□□ -1.91
Usp28Q5I043 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Usp28Q5I043 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Usp28Q5I043 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Usp28Q5I043 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.1□□□□□ -1.91
Usp28Q5I043 Gm12268-201ENSMUST00000118398 442 ntBASIC3.1□□□□□ -1.91
Usp28Q5I043 Gm2003-201ENSMUST00000118537 636 ntBASIC3.1□□□□□ -1.91
Usp28Q5I043 Gm14881-201ENSMUST00000120366 372 ntBASIC3.1□□□□□ -1.91
Usp28Q5I043 Gm1989-201ENSMUST00000126244 636 ntBASIC3.1□□□□□ -1.91
Usp28Q5I043 Gm14562-201ENSMUST00000129885 543 ntBASIC3.1□□□□□ -1.91
Usp28Q5I043 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Usp28Q5I043 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Usp28Q5I043 Gm26365-201ENSMUST00000179177 94 ntBASIC3.1□□□□□ -1.91
Usp28Q5I043 Mir8103-201ENSMUST00000183945 107 ntBASIC3.1□□□□□ -1.91
Usp28Q5I043 Gm29013-201ENSMUST00000187431 237 ntBASIC3.1□□□□□ -1.91
Usp28Q5I043 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Usp28Q5I043 Gm37428-201ENSMUST00000193886 137 ntBASIC3.1□□□□□ -1.91
Usp28Q5I043 Gm42438-201ENSMUST00000197832 974 ntBASIC3.1□□□□□ -1.91
Usp28Q5I043 Gm43198-201ENSMUST00000200927 326 ntBASIC3.1□□□□□ -1.91
Usp28Q5I043 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.1□□□□□ -1.91
Usp28Q5I043 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.1□□□□□ -1.91
Usp28Q5I043 Gm9712-201ENSMUST00000210842 311 ntBASIC3.1□□□□□ -1.91
Usp28Q5I043 AC159476.2-201ENSMUST00000216221 418 ntBASIC3.1□□□□□ -1.91
Usp28Q5I043 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms