Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Mir669p-2-201ENSMUST00000103868 87 ntBASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Mir669p-1-201ENSMUST00000103884 87 ntBASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Mir883a-201ENSMUST00000104824 76 ntBASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Gm11577-201ENSMUST00000118030 737 ntBASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Gm15312-201ENSMUST00000118827 271 ntBASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Gm11704-201ENSMUST00000120031 214 ntBASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Gm12884-201ENSMUST00000120371 325 ntBASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Gm15309-201ENSMUST00000121644 240 ntBASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Gm22034-201ENSMUST00000157283 134 ntBASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Gm17117-201ENSMUST00000163665 299 ntBASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Gm20415-201ENSMUST00000172877 423 ntBASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Gm37417-201ENSMUST00000195257 454 ntBASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Gm43489-201ENSMUST00000196810 993 ntBASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Gm29754-201ENSMUST00000206269 358 ntBASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.18□□□□□ -1.9
Trim40Q3UWA4 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trim40Q3UWA4 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Gm23516-201ENSMUST00000093728 107 ntBASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.18□□□□□ -1.9
Trim40Q3UWA4 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Snord66-201ENSMUST00000104051 75 ntBASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Gm22091-201ENSMUST00000116908 127 ntBASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Gm12025-201ENSMUST00000117768 144 ntBASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Gm5762-201ENSMUST00000119204 258 ntBASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Gm16005-201ENSMUST00000120515 269 ntBASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Gm16569-201ENSMUST00000160526 314 ntBASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Gm17054-201ENSMUST00000169811 259 ntBASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Gm27676-201ENSMUST00000183669 61 ntBASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Gm37979-201ENSMUST00000193065 712 ntBASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Gm38076-201ENSMUST00000193889 450 ntBASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Gm37791-201ENSMUST00000195081 286 ntBASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Gm18557-201ENSMUST00000218710 433 ntBASIC3.17□□□□□ -1.9
Trim40Q3UWA4 AC166358.6-201ENSMUST00000221834 1206 ntBASIC3.17□□□□□ -1.9
Trim40Q3UWA4 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.17□□□□□ -1.9
Trim40Q3UWA4 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.17□□□□□ -1.9
Trim40Q3UWA4 AC154532.2-201ENSMUST00000228947 598 ntBASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Gm26165-201ENSMUST00000083791 138 ntBASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.17□□□□□ -1.9
Trim40Q3UWA4 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Mir1198-201ENSMUST00000116995 121 ntBASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Gm14627-201ENSMUST00000118931 567 ntBASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Gm12748-201ENSMUST00000120763 504 ntBASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Gm22120-201ENSMUST00000175590 70 ntBASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Gm28148-201ENSMUST00000186924 697 ntBASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Gm28113-201ENSMUST00000188280 229 ntBASIC3.16□□□□□ -1.9
Trim40Q3UWA4 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Gm19177-201ENSMUST00000204520 613 ntBASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Gm45553-201ENSMUST00000209929 507 ntBASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Gm9712-201ENSMUST00000210842 311 ntBASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Gm45327-201ENSMUST00000211612 565 ntBASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC3.16□□□□□ -1.9
Trim40Q3UWA4 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.16□□□□□ -1.9
Trim40Q3UWA4 AC159297.2-201ENSMUST00000219567 1075 ntBASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Gm31849-201ENSMUST00000220306 375 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms