Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Mir6963-201ENSMUST00000183535 71 ntBASIC5.22□□□□□ -1.57
Gm28047Q3US59 Gm27521-201ENSMUST00000184022 64 ntBASIC5.22□□□□□ -1.57
Gm28047Q3US59 Gm36985-201ENSMUST00000195595 379 ntBASIC5.22□□□□□ -1.57
Gm28047Q3US59 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC5.22□□□□□ -1.57
Gm28047Q3US59 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.22□□□□□ -1.57
Gm28047Q3US59 Gm44320-201ENSMUST00000199276 86 ntBASIC5.22□□□□□ -1.57
Gm28047Q3US59 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC5.22□□□□□ -1.57
Gm28047Q3US59 Gm44125-201ENSMUST00000203068 448 ntBASIC5.22□□□□□ -1.57
Gm28047Q3US59 Gm44054-201ENSMUST00000203814 372 ntBASIC5.22□□□□□ -1.57
Gm28047Q3US59 Gm43919-201ENSMUST00000204303 364 ntBASIC5.22□□□□□ -1.57
Gm28047Q3US59 Gm45590-201ENSMUST00000209715 262 ntBASIC5.22□□□□□ -1.57
Gm28047Q3US59 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC5.22□□□□□ -1.57
Gm28047Q3US59 AC117240.2-201ENSMUST00000220921 263 ntBASIC5.22□□□□□ -1.57
Gm28047Q3US59 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC5.22□□□□□ -1.57
Gm28047Q3US59 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC5.22□□□□□ -1.57
Gm28047Q3US59 AC156559.1-201ENSMUST00000224158 222 ntBASIC5.22□□□□□ -1.57
Gm28047Q3US59 AC154270.1-201ENSMUST00000227226 426 ntBASIC5.22□□□□□ -1.57
Gm28047Q3US59 Mir30b-201ENSMUST00000083542 96 ntBASIC5.22□□□□□ -1.57
Gm28047Q3US59 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.22□□□□□ -1.57
Gm28047Q3US59 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Gm28047Q3US59 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.22□□□□□ -1.57
Gm28047Q3US59 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Gm28047Q3US59 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Gm28047Q3US59 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Gm28047Q3US59 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
Gm28047Q3US59 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Gm28047Q3US59 Gm5653-201ENSMUST00000223393 1337 ntBASIC5.22□□□□□ -1.57
Gm28047Q3US59 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Gm28047Q3US59 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Gm28047Q3US59 Gm22778-201ENSMUST00000104090 128 ntBASIC5.21□□□□□ -1.58
Gm28047Q3US59 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC5.21□□□□□ -1.58
Gm28047Q3US59 Gm15560-201ENSMUST00000117107 643 ntBASIC5.21□□□□□ -1.58
Gm28047Q3US59 Gm12230-201ENSMUST00000118301 454 ntBASIC5.21□□□□□ -1.58
Gm28047Q3US59 Gm14500-201ENSMUST00000121647 113 ntBASIC5.21□□□□□ -1.58
Gm28047Q3US59 Gm14947-201ENSMUST00000133704 303 ntBASIC5.21□□□□□ -1.58
Gm28047Q3US59 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC5.21□□□□□ -1.58
Gm28047Q3US59 Gm22870-201ENSMUST00000157501 112 ntBASIC5.21□□□□□ -1.58
Gm28047Q3US59 Gm24188-201ENSMUST00000157980 108 ntBASIC5.21□□□□□ -1.58
Gm28047Q3US59 Gm24106-201ENSMUST00000175498 127 ntBASIC5.21□□□□□ -1.58
Gm28047Q3US59 Mir6926-201ENSMUST00000184562 68 ntBASIC5.21□□□□□ -1.58
Gm28047Q3US59 Gm27457-201ENSMUST00000184771 156 ntBASIC5.21□□□□□ -1.58
Gm28047Q3US59 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.21□□□□□ -1.58
Gm28047Q3US59 Gm28921-201ENSMUST00000190219 378 ntBASIC5.21□□□□□ -1.58
Gm28047Q3US59 Gm37997-201ENSMUST00000193515 267 ntBASIC5.21□□□□□ -1.58
Gm28047Q3US59 Gm37801-201ENSMUST00000194754 274 ntBASIC5.21□□□□□ -1.58
Gm28047Q3US59 Gm43828-201ENSMUST00000196890 639 ntBASIC5.21□□□□□ -1.58
Gm28047Q3US59 Gm17775-201ENSMUST00000198542 258 ntBASIC5.21□□□□□ -1.58
Gm28047Q3US59 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.21□□□□□ -1.58
Gm28047Q3US59 Gm17779-201ENSMUST00000213395 394 ntBASIC5.21□□□□□ -1.58
Gm28047Q3US59 AC124346.1-201ENSMUST00000218539 364 ntBASIC5.21□□□□□ -1.58
Gm28047Q3US59 AC158803.1-201ENSMUST00000219495 316 ntBASIC5.21□□□□□ -1.58
Gm28047Q3US59 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.21□□□□□ -1.58
Gm28047Q3US59 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Gm28047Q3US59 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Gm28047Q3US59 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Gm28047Q3US59 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.21□□□□□ -1.58
Gm28047Q3US59 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Gm28047Q3US59 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Gm28047Q3US59 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Gm28047Q3US59 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Gm28047Q3US59 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Gm28047Q3US59 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.2□□□□□ -1.58
Gm28047Q3US59 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Gm28047Q3US59 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm25538-201ENSMUST00000101943 107 ntBASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm22272-201ENSMUST00000104039 134 ntBASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm23594-201ENSMUST00000104307 134 ntBASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm26320-201ENSMUST00000157742 306 ntBASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm25447-201ENSMUST00000158997 128 ntBASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm6486-201ENSMUST00000166202 434 ntBASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm20674-201ENSMUST00000177452 369 ntBASIC5.2□□□□□ -1.58
Gm28047Q3US59 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm6214-201ENSMUST00000178845 541 ntBASIC5.2□□□□□ -1.58
Gm28047Q3US59 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm29665-201ENSMUST00000191457 528 ntBASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm18403-201ENSMUST00000192907 529 ntBASIC5.2□□□□□ -1.58
Gm28047Q3US59 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm44474-201ENSMUST00000196525 127 ntBASIC5.2□□□□□ -1.58
Gm28047Q3US59 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm44611-201ENSMUST00000207507 355 ntBASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm45023-201ENSMUST00000207951 379 ntBASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm18442-201ENSMUST00000220925 639 ntBASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC5.2□□□□□ -1.58
Gm28047Q3US59 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm2710-201ENSMUST00000073196 603 ntBASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm8724-201ENSMUST00000081668 483 ntBASIC5.2□□□□□ -1.58
Gm28047Q3US59 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.2□□□□□ -1.58
Gm28047Q3US59 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Gm28047Q3US59 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Gm28047Q3US59 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
Gm28047Q3US59 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Gm28047Q3US59 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.19□□□□□ -1.58
Gm28047Q3US59 Gm42946-201ENSMUST00000196108 2570 ntBASIC5.19□□□□□ -1.58
Gm28047Q3US59 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.19□□□□□ -1.58
Gm28047Q3US59 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms