Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm43368-201ENSMUST00000200638 409 ntBASIC3.14□□□□□ -1.91
Upf3aQ3ULJ3 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.14□□□□□ -1.91
Upf3aQ3ULJ3 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.14□□□□□ -1.91
Upf3aQ3ULJ3 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.14□□□□□ -1.91
Upf3aQ3ULJ3 AC154257.2-201ENSMUST00000224166 340 ntBASIC3.14□□□□□ -1.91
Upf3aQ3ULJ3 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Upf3aQ3ULJ3 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.14□□□□□ -1.91
Upf3aQ3ULJ3 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Gm12787-201ENSMUST00000119234 396 ntBASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Gm15488-201ENSMUST00000121682 670 ntBASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Gm13471-201ENSMUST00000122057 433 ntBASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Gm11575-201ENSMUST00000122243 228 ntBASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Gm17204-201ENSMUST00000167936 478 ntBASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Mir6401-201ENSMUST00000184499 109 ntBASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Gm37708-201ENSMUST00000192337 895 ntBASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Gm43239-201ENSMUST00000200131 201 ntBASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Gm19244-201ENSMUST00000204340 253 ntBASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Gm43992-201ENSMUST00000204358 197 ntBASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Gm44562-201ENSMUST00000207194 1347 ntBASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Upf3aQ3ULJ3 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Mir693-201ENSMUST00000102187 89 ntBASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm24890-201ENSMUST00000104389 102 ntBASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm16400-201ENSMUST00000116523 1029 ntBASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm16458-201ENSMUST00000121428 502 ntBASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm24960-201ENSMUST00000157923 90 ntBASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm28552-201ENSMUST00000190725 388 ntBASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm29524-201ENSMUST00000190819 699 ntBASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm5551-201ENSMUST00000199720 690 ntBASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm42474-201ENSMUST00000201073 505 ntBASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm18598-201ENSMUST00000207724 597 ntBASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm45312-201ENSMUST00000210566 311 ntBASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm46233-201ENSMUST00000217831 449 ntBASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 AC154424.1-201ENSMUST00000225883 799 ntBASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm22575-201ENSMUST00000082981 110 ntBASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Olfr203-201ENSMUST00000089305 924 ntBASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Upf3aQ3ULJ3 Gm42967-201ENSMUST00000198647 2312 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Gm25313-201ENSMUST00000101817 116 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Gm12495-201ENSMUST00000119750 447 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Gm25280-201ENSMUST00000157269 101 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Mir5123-201ENSMUST00000177794 83 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Gm23287-201ENSMUST00000179427 116 ntBASIC3.11□□□□□ -1.91
Upf3aQ3ULJ3 Gm23143-201ENSMUST00000180137 116 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms