Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Mir421-201ENSMUST00000083575 76 ntBASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.15□□□□□ -1.9
Trafd1Q3UDK1 Gm22709-201ENSMUST00000116893 111 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Gm14622-201ENSMUST00000117117 468 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Gm14833-201ENSMUST00000118345 1027 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Gm13228-201ENSMUST00000118937 634 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Gm14517-201ENSMUST00000119040 337 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Gm14607-201ENSMUST00000119119 491 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Gm11598-201ENSMUST00000119257 357 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Gm13511-201ENSMUST00000121167 363 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Gm23111-201ENSMUST00000122652 105 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Gm23234-201ENSMUST00000157304 134 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Gm22722-201ENSMUST00000157467 132 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Gm24213-201ENSMUST00000158255 258 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Gm22833-201ENSMUST00000158292 132 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Gm3470-201ENSMUST00000160819 420 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Gm17085-201ENSMUST00000165425 502 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Mir3106-201ENSMUST00000175401 82 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Gm43214-201ENSMUST00000199242 352 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Gm7726-201ENSMUST00000206241 231 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Gm44688-201ENSMUST00000209083 537 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Gm45636-201ENSMUST00000210497 1064 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 AC154552.5-201ENSMUST00000222352 207 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Olfr203-201ENSMUST00000089305 924 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trafd1Q3UDK1 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm24273-201ENSMUST00000102332 164 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm25376-201ENSMUST00000104340 133 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm12584-201ENSMUST00000117109 1105 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm14971-201ENSMUST00000117980 663 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm15244-201ENSMUST00000121122 130 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm16412-201ENSMUST00000121602 273 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm15111-201ENSMUST00000122142 878 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm22794-201ENSMUST00000157228 306 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm10177-202ENSMUST00000161698 207 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Mir6401-201ENSMUST00000184499 109 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm18667-201ENSMUST00000186523 484 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm38154-201ENSMUST00000195444 340 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm37290-201ENSMUST00000195775 339 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm44727-201ENSMUST00000204225 451 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm43932-201ENSMUST00000204499 52 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm35262-201ENSMUST00000215133 267 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 AC091260.1-201ENSMUST00000216112 229 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm7540-201ENSMUST00000219764 926 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 AC154636.3-201ENSMUST00000221489 1214 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 AC131085.1-201ENSMUST00000224746 656 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 AC125464.1-201ENSMUST00000228013 512 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Gm23738-201ENSMUST00000082828 171 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trafd1Q3UDK1 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms