Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Ptchd3Q0EEE2 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Ptchd3Q0EEE2 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Mir466n-201ENSMUST00000104798 94 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Gm22488-201ENSMUST00000116811 127 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Gm14358-201ENSMUST00000118458 403 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Gm9119-201ENSMUST00000118866 495 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Gm14901-201ENSMUST00000119001 283 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Gm11913-201ENSMUST00000119094 336 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Gm9440-201ENSMUST00000119667 539 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Gm12607-201ENSMUST00000120724 493 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Gm13341-201ENSMUST00000120780 672 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Gm17085-201ENSMUST00000165425 502 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Gm2930-201ENSMUST00000170403 474 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Mir3106-201ENSMUST00000175401 82 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Gm4479-201ENSMUST00000178807 171 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Gm6900-201ENSMUST00000178971 342 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Gm28030-201ENSMUST00000184987 138 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Gm43384-201ENSMUST00000200569 637 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 LOC667541-201ENSMUST00000223408 278 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 AC102352.1-201ENSMUST00000224187 582 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ptchd3Q0EEE2 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Gm14794-201ENSMUST00000118181 192 ntBASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Gm11268-201ENSMUST00000118347 267 ntBASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Gm15025-201ENSMUST00000118434 418 ntBASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Gm12722-201ENSMUST00000118507 493 ntBASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Gm15038-201ENSMUST00000122144 296 ntBASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Gm22026-201ENSMUST00000122735 281 ntBASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Gm24745-201ENSMUST00000157840 85 ntBASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Gm23053-201ENSMUST00000175136 96 ntBASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Gm26866-201ENSMUST00000180414 802 ntBASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Gm28956-201ENSMUST00000189047 427 ntBASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Gm45312-201ENSMUST00000210566 311 ntBASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Gm39147-201ENSMUST00000211376 465 ntBASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Gm18252-203ENSMUST00000215855 757 ntBASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 AC125464.1-201ENSMUST00000228013 512 ntBASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Ptchd3Q0EEE2 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Gm25414-201ENSMUST00000101814 107 ntBASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Gm25833-201ENSMUST00000104137 133 ntBASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Gm25420-201ENSMUST00000104216 127 ntBASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Gm24792-201ENSMUST00000104286 128 ntBASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Gm12492-201ENSMUST00000117665 564 ntBASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Gm14651-201ENSMUST00000147192 442 ntBASIC3.21□□□□□ -1.9
Ptchd3Q0EEE2 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms