Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col8a1Q00780 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC4.08□□□□□ -1.76
Col8a1Q00780 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC4.08□□□□□ -1.76
Col8a1Q00780 Gm5750-201ENSMUST00000218711 801 ntBASIC4.08□□□□□ -1.76
Col8a1Q00780 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Col8a1Q00780 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC4.08□□□□□ -1.76
Col8a1Q00780 AC147633.1-201ENSMUST00000225134 259 ntBASIC4.08□□□□□ -1.76
Col8a1Q00780 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Col8a1Q00780 Gm26330-201ENSMUST00000082817 104 ntBASIC4.08□□□□□ -1.76
Col8a1Q00780 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.08□□□□□ -1.76
Col8a1Q00780 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.08□□□□□ -1.76
Col8a1Q00780 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col8a1Q00780 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col8a1Q00780 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm38307-201ENSMUST00000195630 1840 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm43462-201ENSMUST00000200265 3648 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Col8a1Q00780 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm37779-201ENSMUST00000194221 3380 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col8a1Q00780 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col8a1Q00780 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm15088-201ENSMUST00000117973 1508 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm15098-201ENSMUST00000119036 1508 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col8a1Q00780 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
Col8a1Q00780 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col8a1Q00780 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Col8a1Q00780 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm15263-201ENSMUST00000121556 642 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm23789-201ENSMUST00000122536 301 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm24240-201ENSMUST00000157785 135 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm23262-201ENSMUST00000158323 168 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm27805-201ENSMUST00000184513 79 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.07□□□□□ -1.76
Col8a1Q00780 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm19498-201ENSMUST00000191128 331 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm37097-201ENSMUST00000193676 336 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm7871-201ENSMUST00000195346 618 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm42990-201ENSMUST00000199231 312 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm19177-201ENSMUST00000204520 613 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm8745-201ENSMUST00000207846 782 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm45539-201ENSMUST00000210313 428 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm45704-201ENSMUST00000212582 403 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.07□□□□□ -1.76
Col8a1Q00780 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 AC173482.5-201ENSMUST00000224181 327 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Snord47-201ENSMUST00000083034 77 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm23731-201ENSMUST00000083749 107 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col8a1Q00780 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col8a1Q00780 Neat1-201ENSMUST00000173672 20771 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col8a1Q00780 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.07□□□□□ -1.76
Col8a1Q00780 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Col8a1Q00780 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col8a1Q00780 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col8a1Q00780 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.07□□□□□ -1.76
Col8a1Q00780 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col8a1Q00780 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col8a1Q00780 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col8a1Q00780 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col8a1Q00780 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Col8a1Q00780 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col8a1Q00780 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col8a1Q00780 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm14823-201ENSMUST00000117698 238 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm14792-201ENSMUST00000119725 258 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm11830-201ENSMUST00000120175 561 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm15799-201ENSMUST00000120899 289 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm14564-201ENSMUST00000122159 294 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm22718-201ENSMUST00000122701 315 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC4.06□□□□□ -1.76
Col8a1Q00780 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm22792-201ENSMUST00000157225 133 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm24689-201ENSMUST00000157760 104 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm24001-201ENSMUST00000158463 85 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm24976-201ENSMUST00000158972 135 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm4222-201ENSMUST00000165784 470 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Mir3112-201ENSMUST00000175431 82 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm24100-201ENSMUST00000178592 79 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm8807-201ENSMUST00000179328 492 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms