Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm24829-201ENSMUST00000179245 92 ntBASIC4.37□□□□□ -1.71
Ercc3P49135 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC4.37□□□□□ -1.71
Ercc3P49135 Gm26988-201ENSMUST00000183296 945 ntBASIC4.37□□□□□ -1.71
Ercc3P49135 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Ercc3P49135 Gm17781-201ENSMUST00000195232 649 ntBASIC4.37□□□□□ -1.71
Ercc3P49135 Gm42805-201ENSMUST00000196158 276 ntBASIC4.37□□□□□ -1.71
Ercc3P49135 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.37□□□□□ -1.71
Ercc3P49135 Gm18429-201ENSMUST00000198707 421 ntBASIC4.37□□□□□ -1.71
Ercc3P49135 AC124542.1-201ENSMUST00000205588 908 ntBASIC4.37□□□□□ -1.71
Ercc3P49135 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.37□□□□□ -1.71
Ercc3P49135 AC102575.1-201ENSMUST00000225348 547 ntBASIC4.37□□□□□ -1.71
Ercc3P49135 AC124729.1-202ENSMUST00000225587 938 ntBASIC4.37□□□□□ -1.71
Ercc3P49135 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.37□□□□□ -1.71
Ercc3P49135 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ercc3P49135 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ercc3P49135 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.37□□□□□ -1.71
Ercc3P49135 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ercc3P49135 Gm336-201ENSMUST00000186376 1480 ntBASIC4.37□□□□□ -1.71
Ercc3P49135 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.36□□□□□ -1.71
Ercc3P49135 Gm22091-201ENSMUST00000116908 127 ntBASIC4.36□□□□□ -1.71
Ercc3P49135 Gm15026-201ENSMUST00000119219 458 ntBASIC4.36□□□□□ -1.71
Ercc3P49135 Gm6587-201ENSMUST00000120219 613 ntBASIC4.36□□□□□ -1.71
Ercc3P49135 Gm25318-201ENSMUST00000122554 314 ntBASIC4.36□□□□□ -1.71
Ercc3P49135 Gm24836-201ENSMUST00000122609 108 ntBASIC4.36□□□□□ -1.71
Ercc3P49135 Gm16327-201ENSMUST00000137146 228 ntBASIC4.36□□□□□ -1.71
Ercc3P49135 Gm27308-201ENSMUST00000184807 233 ntBASIC4.36□□□□□ -1.71
Ercc3P49135 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Ercc3P49135 Gm37337-201ENSMUST00000192601 993 ntBASIC4.36□□□□□ -1.71
Ercc3P49135 Gm38088-201ENSMUST00000195829 241 ntBASIC4.36□□□□□ -1.71
Ercc3P49135 Gm44125-201ENSMUST00000203068 448 ntBASIC4.36□□□□□ -1.71
Ercc3P49135 Gm44181-201ENSMUST00000203106 483 ntBASIC4.36□□□□□ -1.71
Ercc3P49135 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Ercc3P49135 AC101677.1-201ENSMUST00000218590 158 ntBASIC4.36□□□□□ -1.71
Ercc3P49135 Gm18557-201ENSMUST00000218710 433 ntBASIC4.36□□□□□ -1.71
Ercc3P49135 Gm23733-201ENSMUST00000083750 106 ntBASIC4.36□□□□□ -1.71
Ercc3P49135 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ercc3P49135 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.36□□□□□ -1.71
Ercc3P49135 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ercc3P49135 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ercc3P49135 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Ercc3P49135 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ercc3P49135 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ercc3P49135 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ercc3P49135 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Ercc3P49135 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ercc3P49135 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ercc3P49135 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ercc3P49135 Gm13650-201ENSMUST00000117729 433 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Gm14899-201ENSMUST00000118673 548 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Gm15113-201ENSMUST00000119280 836 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Gm12891-201ENSMUST00000119358 240 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Gm12458-201ENSMUST00000119387 495 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Gm15060-201ENSMUST00000119550 948 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Gm11896-201ENSMUST00000121105 820 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Gm13511-201ENSMUST00000121167 363 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Gm2020-201ENSMUST00000145242 579 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC4.35□□□□□ -1.71
Ercc3P49135 Gm24910-201ENSMUST00000157289 272 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Gm24553-201ENSMUST00000158653 131 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ercc3P49135 Gm23415-201ENSMUST00000175519 83 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ercc3P49135 Spin2g-201ENSMUST00000178425 687 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Mir6385-201ENSMUST00000184295 105 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Gm28648-201ENSMUST00000190092 343 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
Ercc3P49135 Gm5829-201ENSMUST00000191383 351 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Gm17771-201ENSMUST00000194477 1147 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Igkv2-105-201ENSMUST00000196931 377 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Igkv8-31-201ENSMUST00000200040 372 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ercc3P49135 Gm45048-201ENSMUST00000207058 429 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC4.35□□□□□ -1.71
Ercc3P49135 Gm18116-201ENSMUST00000220920 537 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 AC124400.1-201ENSMUST00000225779 193 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 AC114916.1-201ENSMUST00000228465 494 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ercc3P49135 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ercc3P49135 Gm25205-201ENSMUST00000082841 103 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Gm42942-201ENSMUST00000196086 1328 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 AC169038.1-201ENSMUST00000227378 1352 ntBASIC4.35□□□□□ -1.71
Ercc3P49135 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ercc3P49135 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ercc3P49135 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ercc3P49135 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Ercc3P49135 Gm42909-201ENSMUST00000196982 3619 ntBASIC4.34□□□□□ -1.71
Ercc3P49135 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Ercc3P49135 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Ercc3P49135 Gm25727-201ENSMUST00000104522 131 ntBASIC4.34□□□□□ -1.71
Ercc3P49135 Gm7308-201ENSMUST00000121087 447 ntBASIC4.34□□□□□ -1.71
Ercc3P49135 Gm12693-201ENSMUST00000121965 483 ntBASIC4.34□□□□□ -1.71
Ercc3P49135 Gm14768-201ENSMUST00000122126 678 ntBASIC4.34□□□□□ -1.71
Ercc3P49135 Gm24551-201ENSMUST00000158645 92 ntBASIC4.34□□□□□ -1.71
Ercc3P49135 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC4.34□□□□□ -1.71
Ercc3P49135 Gm5709-201ENSMUST00000177879 1165 ntBASIC4.34□□□□□ -1.71
Ercc3P49135 Gm37979-201ENSMUST00000193065 712 ntBASIC4.34□□□□□ -1.71
Ercc3P49135 AC101945.3-201ENSMUST00000226568 153 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 115.8 ms