Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm21588-201ENSMUST00000180074 498 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm21780-201ENSMUST00000180128 498 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm21572-201ENSMUST00000180134 498 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm21529-201ENSMUST00000180175 498 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm29370-202ENSMUST00000187476 499 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm6137-201ENSMUST00000187552 578 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm28717-201ENSMUST00000189950 315 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm44349-201ENSMUST00000197048 123 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Rfx1P48377 Gm44083-201ENSMUST00000203114 337 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC5.51□□□□□ -1.53
Rfx1P48377 Gm44816-201ENSMUST00000206666 477 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm45119-201ENSMUST00000207612 199 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 AC167229.1-201ENSMUST00000220057 469 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 CT572985.2-201ENSMUST00000220496 211 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC5.51□□□□□ -1.53
Rfx1P48377 Gm7665-201ENSMUST00000076710 297 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm23300-201ENSMUST00000082712 125 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm22155-201ENSMUST00000083836 162 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Olfr575-201ENSMUST00000084812 957 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Rfx1P48377 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Rfx1P48377 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Rfx1P48377 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm37642-201ENSMUST00000193166 1735 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Rfx1P48377 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Rfx1P48377 Gm44164-201ENSMUST00000203605 2561 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 AC122840.2-201ENSMUST00000221030 2659 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Rfx1P48377 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Rfx1P48377 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Rfx1P48377 Gm43736-201ENSMUST00000196377 2281 ntBASIC5.5□□□□□ -1.53
Rfx1P48377 Gm45483-201ENSMUST00000209845 1682 ntBASIC5.5□□□□□ -1.53
Rfx1P48377 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Rfx1P48377 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Rfx1P48377 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Rfx1P48377 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Rfx1P48377 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Rfx1P48377 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Rfx1P48377 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Rfx1P48377 Mir1188-201ENSMUST00000116756 120 ntBASIC5.5□□□□□ -1.53
Rfx1P48377 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.5□□□□□ -1.53
Rfx1P48377 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.5□□□□□ -1.53
Rfx1P48377 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC5.5□□□□□ -1.53
Rfx1P48377 Gm25606-201ENSMUST00000158363 95 ntBASIC5.5□□□□□ -1.53
Rfx1P48377 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC5.5□□□□□ -1.53
Rfx1P48377 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Rfx1P48377 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.5□□□□□ -1.53
Rfx1P48377 Gm42453-201ENSMUST00000200477 409 ntBASIC5.5□□□□□ -1.53
Rfx1P48377 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.5□□□□□ -1.53
Rfx1P48377 Gm45200-201ENSMUST00000207434 919 ntBASIC5.5□□□□□ -1.53
Rfx1P48377 AC138290.2-201ENSMUST00000218822 369 ntBASIC5.5□□□□□ -1.53
Rfx1P48377 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Rfx1P48377 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Rfx1P48377 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
Rfx1P48377 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Rfx1P48377 Neat1-201ENSMUST00000173672 20771 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Rfx1P48377 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC5.49□□□□□ -1.53
Rfx1P48377 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Rfx1P48377 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Rfx1P48377 Gm13672-201ENSMUST00000117554 459 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Gm14107-201ENSMUST00000117774 330 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Gm16216-201ENSMUST00000118970 1111 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Gm14861-201ENSMUST00000119451 455 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC5.49□□□□□ -1.53
Rfx1P48377 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Gm26195-201ENSMUST00000175035 101 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Gm9022-202ENSMUST00000183285 483 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Gm28017-201ENSMUST00000183434 126 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Gm27608-201ENSMUST00000184822 162 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Gm28951-201ENSMUST00000190742 313 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Gm37881-201ENSMUST00000193001 421 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC5.49□□□□□ -1.53
Rfx1P48377 Gm8069-201ENSMUST00000197887 154 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Gm43393-201ENSMUST00000200147 194 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Rfx1P48377 Gm18325-201ENSMUST00000203228 835 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Gm44402-201ENSMUST00000203677 238 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Gm44825-201ENSMUST00000207557 150 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Gm44598-201ENSMUST00000207566 150 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Gm45101-201ENSMUST00000208327 232 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Gm45704-201ENSMUST00000212582 403 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Gm45772-201ENSMUST00000212961 240 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 AC119241.1-201ENSMUST00000223651 534 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Gm10237-201ENSMUST00000078393 273 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Gm23412-201ENSMUST00000083017 107 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Gm25937-201ENSMUST00000083912 107 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Rfx1P48377 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Rfx1P48377 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Rfx1P48377 Gm42616-201ENSMUST00000198989 4184 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Rfx1P48377 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.49□□□□□ -1.53
Rfx1P48377 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms