Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm26178-201ENSMUST00000177706 107 ntBASIC2.32□□□□□ -2.04
Tnfsf4P43488 Gm26465-201ENSMUST00000178517 107 ntBASIC2.32□□□□□ -2.04
Tnfsf4P43488 Gm24317-201ENSMUST00000178536 107 ntBASIC2.32□□□□□ -2.04
Tnfsf4P43488 Gm25021-201ENSMUST00000179184 107 ntBASIC2.32□□□□□ -2.04
Tnfsf4P43488 Gm22995-201ENSMUST00000179670 107 ntBASIC2.32□□□□□ -2.04
Tnfsf4P43488 Gm24424-201ENSMUST00000179714 107 ntBASIC2.32□□□□□ -2.04
Tnfsf4P43488 Gm24389-201ENSMUST00000179962 107 ntBASIC2.32□□□□□ -2.04
Tnfsf4P43488 Gm25672-201ENSMUST00000180111 107 ntBASIC2.32□□□□□ -2.04
Tnfsf4P43488 Gm27025-201ENSMUST00000182392 942 ntBASIC2.32□□□□□ -2.04
Tnfsf4P43488 Gm27379-201ENSMUST00000183730 123 ntBASIC2.32□□□□□ -2.04
Tnfsf4P43488 Gm29163-201ENSMUST00000188029 107 ntBASIC2.32□□□□□ -2.04
Tnfsf4P43488 Gm28060-201ENSMUST00000191554 189 ntBASIC2.32□□□□□ -2.04
Tnfsf4P43488 Gm18692-201ENSMUST00000193047 511 ntBASIC2.32□□□□□ -2.04
Tnfsf4P43488 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Tnfsf4P43488 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Tnfsf4P43488 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Tnfsf4P43488 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Tnfsf4P43488 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.32□□□□□ -2.04
Tnfsf4P43488 Gm23815-201ENSMUST00000083231 107 ntBASIC2.32□□□□□ -2.04
Tnfsf4P43488 Gm23520-201ENSMUST00000093736 107 ntBASIC2.32□□□□□ -2.04
Tnfsf4P43488 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Tnfsf4P43488 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Tnfsf4P43488 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Tnfsf4P43488 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.31□□□□□ -2.04
Tnfsf4P43488 Mir682-201ENSMUST00000102281 96 ntBASIC2.31□□□□□ -2.04
Tnfsf4P43488 Gm24831-201ENSMUST00000116778 126 ntBASIC2.31□□□□□ -2.04
Tnfsf4P43488 Gm11321-201ENSMUST00000121257 902 ntBASIC2.31□□□□□ -2.04
Tnfsf4P43488 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Tnfsf4P43488 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.31□□□□□ -2.04
Tnfsf4P43488 Gm24771-201ENSMUST00000158508 137 ntBASIC2.31□□□□□ -2.04
Tnfsf4P43488 Gm22947-201ENSMUST00000158559 91 ntBASIC2.31□□□□□ -2.04
Tnfsf4P43488 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Tnfsf4P43488 Gm15900-201ENSMUST00000161584 342 ntBASIC2.31□□□□□ -2.04
Tnfsf4P43488 Gm27155-201ENSMUST00000183716 898 ntBASIC2.31□□□□□ -2.04
Tnfsf4P43488 Gm28191-201ENSMUST00000189112 211 ntBASIC2.31□□□□□ -2.04
Tnfsf4P43488 Gm17967-201ENSMUST00000195319 647 ntBASIC2.31□□□□□ -2.04
Tnfsf4P43488 Gm42438-201ENSMUST00000197832 974 ntBASIC2.31□□□□□ -2.04
Tnfsf4P43488 Gm43550-201ENSMUST00000200597 303 ntBASIC2.31□□□□□ -2.04
Tnfsf4P43488 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC2.31□□□□□ -2.04
Tnfsf4P43488 Gm19244-201ENSMUST00000204340 253 ntBASIC2.31□□□□□ -2.04
Tnfsf4P43488 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC2.31□□□□□ -2.04
Tnfsf4P43488 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Tnfsf4P43488 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Tnfsf4P43488 Gm25739-201ENSMUST00000082886 107 ntBASIC2.31□□□□□ -2.04
Tnfsf4P43488 Olfr895-201ENSMUST00000093864 951 ntBASIC2.31□□□□□ -2.04
Tnfsf4P43488 Gm8074-201ENSMUST00000095071 252 ntBASIC2.31□□□□□ -2.04
Tnfsf4P43488 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Tnfsf4P43488 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Tnfsf4P43488 Gm13487-201ENSMUST00000122240 864 ntBASIC2.3□□□□□ -2.04
Tnfsf4P43488 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.3□□□□□ -2.04
Tnfsf4P43488 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC2.3□□□□□ -2.04
Tnfsf4P43488 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.3□□□□□ -2.04
Tnfsf4P43488 Gm23642-201ENSMUST00000157858 258 ntBASIC2.3□□□□□ -2.04
Tnfsf4P43488 Gm26215-201ENSMUST00000158584 139 ntBASIC2.3□□□□□ -2.04
Tnfsf4P43488 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Tnfsf4P43488 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.3□□□□□ -2.04
Tnfsf4P43488 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.3□□□□□ -2.04
Tnfsf4P43488 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.3□□□□□ -2.04
Tnfsf4P43488 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC2.3□□□□□ -2.04
Tnfsf4P43488 Gm28196-201ENSMUST00000187719 640 ntBASIC2.3□□□□□ -2.04
Tnfsf4P43488 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.3□□□□□ -2.04
Tnfsf4P43488 Mir3069-201ENSMUST00000198802 65 ntBASIC2.3□□□□□ -2.04
Tnfsf4P43488 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC2.3□□□□□ -2.04
Tnfsf4P43488 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.3□□□□□ -2.04
Tnfsf4P43488 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
Tnfsf4P43488 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.3□□□□□ -2.04
Tnfsf4P43488 AC140210.1-201ENSMUST00000224961 534 ntBASIC2.3□□□□□ -2.04
Tnfsf4P43488 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.3□□□□□ -2.04
Tnfsf4P43488 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Tnfsf4P43488 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Tnfsf4P43488 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Tnfsf4P43488 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Tnfsf4P43488 AC154481.2-201ENSMUST00000222526 3175 ntBASIC2.3□□□□□ -2.04
Tnfsf4P43488 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Tnfsf4P43488 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Tnfsf4P43488 Gm6215-201ENSMUST00000119297 1386 ntBASIC2.29□□□□□ -2.04
Tnfsf4P43488 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Tnfsf4P43488 Gm24403-201ENSMUST00000104616 130 ntBASIC2.29□□□□□ -2.04
Tnfsf4P43488 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Tnfsf4P43488 Gm11460-201ENSMUST00000118200 361 ntBASIC2.29□□□□□ -2.04
Tnfsf4P43488 Gm14986-201ENSMUST00000121262 1002 ntBASIC2.29□□□□□ -2.04
Tnfsf4P43488 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Tnfsf4P43488 Gm22849-201ENSMUST00000157713 307 ntBASIC2.29□□□□□ -2.04
Tnfsf4P43488 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC2.29□□□□□ -2.04
Tnfsf4P43488 Mir3965-201ENSMUST00000175570 69 ntBASIC2.29□□□□□ -2.04
Tnfsf4P43488 Mir7013-201ENSMUST00000183540 72 ntBASIC2.29□□□□□ -2.04
Tnfsf4P43488 Gm27505-201ENSMUST00000185071 110 ntBASIC2.29□□□□□ -2.04
Tnfsf4P43488 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.29□□□□□ -2.04
Tnfsf4P43488 Gm37219-201ENSMUST00000192036 926 ntBASIC2.29□□□□□ -2.04
Tnfsf4P43488 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC2.29□□□□□ -2.04
Tnfsf4P43488 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC2.29□□□□□ -2.04
Tnfsf4P43488 Gm37417-201ENSMUST00000195257 454 ntBASIC2.29□□□□□ -2.04
Tnfsf4P43488 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Tnfsf4P43488 Gm44519-201ENSMUST00000206486 122 ntBASIC2.29□□□□□ -2.04
Tnfsf4P43488 AC160016.1-201ENSMUST00000215589 448 ntBASIC2.29□□□□□ -2.04
Tnfsf4P43488 Gm18871-201ENSMUST00000218655 745 ntBASIC2.29□□□□□ -2.04
Tnfsf4P43488 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.29□□□□□ -2.04
Tnfsf4P43488 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.29□□□□□ -2.04
Tnfsf4P43488 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.29□□□□□ -2.04
Tnfsf4P43488 AC165437.1-201ENSMUST00000228640 536 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms