Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cdx2P43241 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC2.54□□□□□ -2
Cdx2P43241 Gm22853-201ENSMUST00000174974 131 ntBASIC2.54□□□□□ -2
Cdx2P43241 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC2.54□□□□□ -2
Cdx2P43241 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.54□□□□□ -2
Cdx2P43241 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC2.54□□□□□ -2
Cdx2P43241 Gm30341-201ENSMUST00000194363 289 ntBASIC2.54□□□□□ -2
Cdx2P43241 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Cdx2P43241 Gm18557-201ENSMUST00000218710 433 ntBASIC2.54□□□□□ -2
Cdx2P43241 AC160114.1-201ENSMUST00000221930 365 ntBASIC2.54□□□□□ -2
Cdx2P43241 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.54□□□□□ -2
Cdx2P43241 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.53□□□□□ -2
Cdx2P43241 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.53□□□□□ -2
Cdx2P43241 Gm24541-201ENSMUST00000103871 96 ntBASIC2.53□□□□□ -2
Cdx2P43241 Gm23803-201ENSMUST00000104610 132 ntBASIC2.53□□□□□ -2
Cdx2P43241 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC2.53□□□□□ -2
Cdx2P43241 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.53□□□□□ -2
Cdx2P43241 Gm8902-201ENSMUST00000174341 1096 ntBASIC2.53□□□□□ -2
Cdx2P43241 Gm27025-201ENSMUST00000182392 942 ntBASIC2.53□□□□□ -2
Cdx2P43241 Gm29658-201ENSMUST00000185404 230 ntBASIC2.53□□□□□ -2
Cdx2P43241 Gm28191-201ENSMUST00000189112 211 ntBASIC2.53□□□□□ -2
Cdx2P43241 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.53□□□□□ -2
Cdx2P43241 Gm37807-201ENSMUST00000194310 190 ntBASIC2.53□□□□□ -2
Cdx2P43241 Gm37418-201ENSMUST00000195031 274 ntBASIC2.53□□□□□ -2
Cdx2P43241 Ighv1-79-201ENSMUST00000200152 350 ntBASIC2.53□□□□□ -2
Cdx2P43241 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC2.53□□□□□ -2
Cdx2P43241 Gm44266-201ENSMUST00000205235 500 ntBASIC2.53□□□□□ -2
Cdx2P43241 Gm44844-201ENSMUST00000207242 336 ntBASIC2.53□□□□□ -2
Cdx2P43241 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC2.53□□□□□ -2
Cdx2P43241 AC132104.1-201ENSMUST00000213615 260 ntBASIC2.53□□□□□ -2
Cdx2P43241 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.53□□□□□ -2
Cdx2P43241 CT573085.1-201ENSMUST00000224279 1197 ntBASIC2.53□□□□□ -2
Cdx2P43241 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.53□□□□□ -2
Cdx2P43241 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
Cdx2P43241 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Cdx2P43241 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Cdx2P43241 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Cdx2P43241 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cdx2P43241 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Cdx2P43241 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.52□□□□□ -2.01
Cdx2P43241 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Cdx2P43241 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cdx2P43241 Gm13751-201ENSMUST00000120280 752 ntBASIC2.52□□□□□ -2.01
Cdx2P43241 Gm25883-201ENSMUST00000157781 271 ntBASIC2.52□□□□□ -2.01
Cdx2P43241 Gm22730-201ENSMUST00000158085 171 ntBASIC2.52□□□□□ -2.01
Cdx2P43241 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC2.52□□□□□ -2.01
Cdx2P43241 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.52□□□□□ -2.01
Cdx2P43241 Gm27220-201ENSMUST00000183453 262 ntBASIC2.52□□□□□ -2.01
Cdx2P43241 Mir8103-201ENSMUST00000183945 107 ntBASIC2.52□□□□□ -2.01
Cdx2P43241 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC2.52□□□□□ -2.01
Cdx2P43241 Gm5731-201ENSMUST00000190969 481 ntBASIC2.52□□□□□ -2.01
Cdx2P43241 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Cdx2P43241 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.52□□□□□ -2.01
Cdx2P43241 Gm45701-201ENSMUST00000212049 235 ntBASIC2.52□□□□□ -2.01
Cdx2P43241 Gm45879-201ENSMUST00000212521 392 ntBASIC2.52□□□□□ -2.01
Cdx2P43241 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC2.52□□□□□ -2.01
Cdx2P43241 Gm19563-201ENSMUST00000222031 270 ntBASIC2.52□□□□□ -2.01
Cdx2P43241 Gm9628-201ENSMUST00000222169 725 ntBASIC2.52□□□□□ -2.01
Cdx2P43241 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.52□□□□□ -2.01
Cdx2P43241 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Cdx2P43241 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.52□□□□□ -2.01
Cdx2P43241 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Cdx2P43241 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Cdx2P43241 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Cdx2P43241 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Cdx2P43241 Gm26015-201ENSMUST00000104402 125 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Gm12213-201ENSMUST00000119924 353 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Gm23889-201ENSMUST00000122689 104 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Gm22330-201ENSMUST00000158068 115 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Gm25866-201ENSMUST00000158245 112 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Gm16584-201ENSMUST00000159267 189 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Cdx2P43241 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Cdx2P43241 Gm5967-201ENSMUST00000172723 494 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC2.51□□□□□ -2.01
Cdx2P43241 Gm25525-201ENSMUST00000177701 107 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Gm26178-201ENSMUST00000177706 107 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Gm26465-201ENSMUST00000178517 107 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Gm24317-201ENSMUST00000178536 107 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Gm25021-201ENSMUST00000179184 107 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Gm22995-201ENSMUST00000179670 107 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Gm24424-201ENSMUST00000179714 107 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Gm24389-201ENSMUST00000179962 107 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Gm25672-201ENSMUST00000180111 107 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Gm27796-201ENSMUST00000183863 261 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Gm29163-201ENSMUST00000188029 107 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Gm37417-201ENSMUST00000195257 454 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Gm42438-201ENSMUST00000197832 974 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Gm29815-201ENSMUST00000202418 178 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.51□□□□□ -2.01
Cdx2P43241 Gm7753-201ENSMUST00000221007 867 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 AC153662.1-201ENSMUST00000222220 270 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 AC173481.1-201ENSMUST00000223351 270 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 CT030254.3-201ENSMUST00000225959 1231 ntBASIC2.51□□□□□ -2.01
Cdx2P43241 Gm9762-201ENSMUST00000036976 444 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms