Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.94□□□□□ -1.78
Traf1P39428 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Traf1P39428 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.94□□□□□ -1.78
Traf1P39428 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.94□□□□□ -1.78
Traf1P39428 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Traf1P39428 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Traf1P39428 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Traf1P39428 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Traf1P39428 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Traf1P39428 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Traf1P39428 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Traf1P39428 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Traf1P39428 Gm22497-201ENSMUST00000104499 131 ntBASIC3.93□□□□□ -1.78
Traf1P39428 Gm23532-201ENSMUST00000104569 112 ntBASIC3.93□□□□□ -1.78
Traf1P39428 Gm14622-201ENSMUST00000117117 468 ntBASIC3.93□□□□□ -1.78
Traf1P39428 Gm11268-201ENSMUST00000118347 267 ntBASIC3.93□□□□□ -1.78
Traf1P39428 Gm13059-201ENSMUST00000119881 398 ntBASIC3.93□□□□□ -1.78
Traf1P39428 Gm14581-201ENSMUST00000121726 198 ntBASIC3.93□□□□□ -1.78
Traf1P39428 Gm24936-201ENSMUST00000122598 247 ntBASIC3.93□□□□□ -1.78
Traf1P39428 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.93□□□□□ -1.78
Traf1P39428 Gm22769-201ENSMUST00000158367 98 ntBASIC3.93□□□□□ -1.78
Traf1P39428 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Traf1P39428 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Traf1P39428 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
Traf1P39428 Gm6395-201ENSMUST00000167639 691 ntBASIC3.93□□□□□ -1.78
Traf1P39428 Gm27374-201ENSMUST00000183660 81 ntBASIC3.93□□□□□ -1.78
Traf1P39428 Gm27861-201ENSMUST00000183920 214 ntBASIC3.93□□□□□ -1.78
Traf1P39428 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.93□□□□□ -1.78
Traf1P39428 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Traf1P39428 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.93□□□□□ -1.78
Traf1P39428 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.93□□□□□ -1.78
Traf1P39428 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.93□□□□□ -1.78
Traf1P39428 Gm44720-201ENSMUST00000206076 260 ntBASIC3.93□□□□□ -1.78
Traf1P39428 AL929285.1-201ENSMUST00000215522 229 ntBASIC3.93□□□□□ -1.78
Traf1P39428 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.93□□□□□ -1.78
Traf1P39428 AC131743.3-201ENSMUST00000222099 662 ntBASIC3.93□□□□□ -1.78
Traf1P39428 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Traf1P39428 AC131085.1-201ENSMUST00000224746 656 ntBASIC3.93□□□□□ -1.78
Traf1P39428 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.93□□□□□ -1.78
Traf1P39428 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Traf1P39428 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Traf1P39428 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Traf1P39428 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Traf1P39428 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.93□□□□□ -1.78
Traf1P39428 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
Traf1P39428 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Traf1P39428 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Traf1P39428 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Traf1P39428 Gm7648-201ENSMUST00000173036 1658 ntBASIC3.92□□□□□ -1.78
Traf1P39428 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.92□□□□□ -1.78
Traf1P39428 Gm6762-201ENSMUST00000121769 289 ntBASIC3.92□□□□□ -1.78
Traf1P39428 Gm25341-201ENSMUST00000157461 268 ntBASIC3.92□□□□□ -1.78
Traf1P39428 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.92□□□□□ -1.78
Traf1P39428 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Traf1P39428 Gm27428-201ENSMUST00000184289 110 ntBASIC3.92□□□□□ -1.78
Traf1P39428 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.92□□□□□ -1.78
Traf1P39428 Gm8242-202ENSMUST00000193056 475 ntBASIC3.92□□□□□ -1.78
Traf1P39428 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Traf1P39428 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Traf1P39428 CT010455.1-201ENSMUST00000218579 413 ntBASIC3.92□□□□□ -1.78
Traf1P39428 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Traf1P39428 Olfr815-201ENSMUST00000071557 951 ntBASIC3.92□□□□□ -1.78
Traf1P39428 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Traf1P39428 Mir465-201ENSMUST00000093563 74 ntBASIC3.92□□□□□ -1.78
Traf1P39428 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Traf1P39428 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
Traf1P39428 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.91□□□□□ -1.78
Traf1P39428 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Traf1P39428 Gm14537-201ENSMUST00000117464 599 ntBASIC3.91□□□□□ -1.78
Traf1P39428 Gm13167-201ENSMUST00000118554 578 ntBASIC3.91□□□□□ -1.78
Traf1P39428 Gm13082-201ENSMUST00000118877 561 ntBASIC3.91□□□□□ -1.78
Traf1P39428 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
Traf1P39428 Gm23463-201ENSMUST00000122468 99 ntBASIC3.91□□□□□ -1.78
Traf1P39428 Gm23887-201ENSMUST00000122683 172 ntBASIC3.91□□□□□ -1.78
Traf1P39428 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Traf1P39428 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.91□□□□□ -1.78
Traf1P39428 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC3.91□□□□□ -1.78
Traf1P39428 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Traf1P39428 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Traf1P39428 Gm21638-201ENSMUST00000179473 836 ntBASIC3.91□□□□□ -1.78
Traf1P39428 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Traf1P39428 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Traf1P39428 Gm5983-201ENSMUST00000197739 770 ntBASIC3.91□□□□□ -1.78
Traf1P39428 Gm43227-201ENSMUST00000202239 677 ntBASIC3.91□□□□□ -1.78
Traf1P39428 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.91□□□□□ -1.78
Traf1P39428 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.91□□□□□ -1.78
Traf1P39428 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Traf1P39428 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Traf1P39428 Gm25131-201ENSMUST00000082653 151 ntBASIC3.91□□□□□ -1.78
Traf1P39428 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Traf1P39428 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.91□□□□□ -1.78
Traf1P39428 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Traf1P39428 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Traf1P39428 Gm7869-201ENSMUST00000121457 1322 ntBASIC3.91□□□□□ -1.78
Traf1P39428 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.91□□□□□ -1.78
Traf1P39428 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Traf1P39428 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
Traf1P39428 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.9□□□□□ -1.78
Traf1P39428 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.9□□□□□ -1.78
Traf1P39428 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 113.3 ms