Protein–RNA interactions for Protein: P37913

Lig1, DNA ligase 1, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1P37913 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC4.54□□□□□ -1.68
Lig1P37913 Gm4222-201ENSMUST00000165784 470 ntBASIC4.54□□□□□ -1.68
Lig1P37913 Mir3112-201ENSMUST00000175431 82 ntBASIC4.54□□□□□ -1.68
Lig1P37913 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Lig1P37913 Gm29045-201ENSMUST00000187278 698 ntBASIC4.54□□□□□ -1.68
Lig1P37913 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC4.54□□□□□ -1.68
Lig1P37913 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC4.54□□□□□ -1.68
Lig1P37913 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC4.54□□□□□ -1.68
Lig1P37913 Gm43652-201ENSMUST00000196219 675 ntBASIC4.54□□□□□ -1.68
Lig1P37913 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC4.54□□□□□ -1.68
Lig1P37913 Gm44099-201ENSMUST00000203299 112 ntBASIC4.54□□□□□ -1.68
Lig1P37913 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC4.54□□□□□ -1.68
Lig1P37913 AC132384.9-201ENSMUST00000218085 277 ntBASIC4.54□□□□□ -1.68
Lig1P37913 Gm10264-201ENSMUST00000220589 429 ntBASIC4.54□□□□□ -1.68
Lig1P37913 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC4.54□□□□□ -1.68
Lig1P37913 AC153662.1-201ENSMUST00000222220 270 ntBASIC4.54□□□□□ -1.68
Lig1P37913 AC173481.1-201ENSMUST00000223351 270 ntBASIC4.54□□□□□ -1.68
Lig1P37913 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.54□□□□□ -1.68
Lig1P37913 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Lig1P37913 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Lig1P37913 Mir28a-201ENSMUST00000083560 86 ntBASIC4.54□□□□□ -1.68
Lig1P37913 Mir181a-1-201ENSMUST00000083631 87 ntBASIC4.54□□□□□ -1.68
Lig1P37913 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Lig1P37913 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Lig1P37913 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Lig1P37913 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Lig1P37913 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Lig1P37913 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.54□□□□□ -1.68
Lig1P37913 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.54□□□□□ -1.68
Lig1P37913 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Lig1P37913 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Lig1P37913 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Lig1P37913 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Lig1P37913 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Lig1P37913 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Lig1P37913 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Lig1P37913 Gm24608-201ENSMUST00000104381 136 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Gm11408-201ENSMUST00000117889 519 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Gm12458-201ENSMUST00000119387 495 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Gm6071-201ENSMUST00000119561 440 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Gm11645-201ENSMUST00000121589 649 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Gm22208-201ENSMUST00000122658 110 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Gm25807-201ENSMUST00000122783 305 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.53□□□□□ -1.68
Lig1P37913 Gm25434-201ENSMUST00000158278 167 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Gm22889-201ENSMUST00000158639 58 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Gm9071-201ENSMUST00000165915 474 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Ear-ps3-201ENSMUST00000168308 445 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Mir7658-201ENSMUST00000184043 57 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Gm28843-201ENSMUST00000189198 678 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Gm29546-201ENSMUST00000191171 678 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.53□□□□□ -1.68
Lig1P37913 Gm45553-201ENSMUST00000209929 507 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Gm35558-203ENSMUST00000222264 204 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Ear14-201ENSMUST00000049559 468 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Gm23518-201ENSMUST00000082835 153 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Lig1P37913 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Lig1P37913 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Lig1P37913 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.53□□□□□ -1.68
Lig1P37913 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
Lig1P37913 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.53□□□□□ -1.69
Lig1P37913 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.52□□□□□ -1.69
Lig1P37913 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Lig1P37913 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Lig1P37913 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
Lig1P37913 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Lig1P37913 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.52□□□□□ -1.69
Lig1P37913 Gm37630-201ENSMUST00000194210 1456 ntBASIC4.52□□□□□ -1.69
Lig1P37913 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Lig1P37913 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Lig1P37913 Gm24403-201ENSMUST00000104616 130 ntBASIC4.52□□□□□ -1.69
Lig1P37913 Gm11372-201ENSMUST00000117348 570 ntBASIC4.52□□□□□ -1.69
Lig1P37913 Gm13454-201ENSMUST00000118166 483 ntBASIC4.52□□□□□ -1.69
Lig1P37913 Gm12564-201ENSMUST00000119860 321 ntBASIC4.52□□□□□ -1.69
Lig1P37913 Defa-ps5-201ENSMUST00000121541 279 ntBASIC4.52□□□□□ -1.69
Lig1P37913 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.52□□□□□ -1.69
Lig1P37913 Gm2862-201ENSMUST00000161524 328 ntBASIC4.52□□□□□ -1.69
Lig1P37913 Gm20462-201ENSMUST00000172623 408 ntBASIC4.52□□□□□ -1.69
Lig1P37913 Gm21815-201ENSMUST00000178213 664 ntBASIC4.52□□□□□ -1.69
Lig1P37913 Gm27588-201ENSMUST00000185096 263 ntBASIC4.52□□□□□ -1.69
Lig1P37913 Gm5368-201ENSMUST00000189012 589 ntBASIC4.52□□□□□ -1.69
Lig1P37913 Trbv8-201ENSMUST00000194020 285 ntBASIC4.52□□□□□ -1.69
Lig1P37913 Gm5552-201ENSMUST00000197149 515 ntBASIC4.52□□□□□ -1.69
Lig1P37913 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC4.52□□□□□ -1.69
Lig1P37913 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC4.52□□□□□ -1.69
Lig1P37913 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.52□□□□□ -1.69
Lig1P37913 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.52□□□□□ -1.69
Lig1P37913 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Lig1P37913 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Lig1P37913 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Lig1P37913 Gm25200-201ENSMUST00000083094 130 ntBASIC4.52□□□□□ -1.69
Lig1P37913 Gm24043-201ENSMUST00000083108 116 ntBASIC4.52□□□□□ -1.69
Lig1P37913 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Lig1P37913 Olfr713-201ENSMUST00000098139 975 ntBASIC4.52□□□□□ -1.69
Lig1P37913 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.52□□□□□ -1.69
Lig1P37913 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms