Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.85□□□□□ -1.95
P20040 Gm18026-201ENSMUST00000222789 727 ntBASIC2.85□□□□□ -1.95
P20040 Gnrh1-202ENSMUST00000223929 428 ntBASIC2.85□□□□□ -1.95
P20040 CT030684.2-201ENSMUST00000228946 826 ntBASIC2.85□□□□□ -1.95
P20040 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
P20040 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
P20040 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
P20040 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
P20040 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
P20040 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC2.85□□□□□ -1.95
P20040 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.85□□□□□ -1.95
P20040 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
P20040 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
P20040 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
P20040 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
P20040 Gm7974-201ENSMUST00000117154 408 ntBASIC2.84□□□□□ -1.95
P20040 Gm7123-201ENSMUST00000117647 213 ntBASIC2.84□□□□□ -1.95
P20040 Gm13082-201ENSMUST00000118877 561 ntBASIC2.84□□□□□ -1.95
P20040 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC2.84□□□□□ -1.95
P20040 Gm14898-201ENSMUST00000120202 645 ntBASIC2.84□□□□□ -1.95
P20040 Gm14238-201ENSMUST00000120227 323 ntBASIC2.84□□□□□ -1.95
P20040 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC2.84□□□□□ -1.95
P20040 Gm14581-201ENSMUST00000121726 198 ntBASIC2.84□□□□□ -1.95
P20040 Gm14253-201ENSMUST00000122112 639 ntBASIC2.84□□□□□ -1.95
P20040 Gm25295-201ENSMUST00000122794 306 ntBASIC2.84□□□□□ -1.95
P20040 Gm14368-201ENSMUST00000145305 415 ntBASIC2.84□□□□□ -1.95
P20040 Gm23168-201ENSMUST00000157156 143 ntBASIC2.84□□□□□ -1.95
P20040 Gm26100-201ENSMUST00000157245 127 ntBASIC2.84□□□□□ -1.95
P20040 Gm24914-201ENSMUST00000157285 313 ntBASIC2.84□□□□□ -1.95
P20040 Gm17061-201ENSMUST00000163167 499 ntBASIC2.84□□□□□ -1.95
P20040 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.84□□□□□ -1.95
P20040 Gm26988-201ENSMUST00000183296 945 ntBASIC2.84□□□□□ -1.95
P20040 Gm28785-201ENSMUST00000187478 379 ntBASIC2.84□□□□□ -1.95
P20040 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
P20040 Gm37288-201ENSMUST00000193963 334 ntBASIC2.84□□□□□ -1.95
P20040 Gm7299-201ENSMUST00000194441 581 ntBASIC2.84□□□□□ -1.95
P20040 Gm43070-201ENSMUST00000196938 415 ntBASIC2.84□□□□□ -1.95
P20040 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.84□□□□□ -1.95
P20040 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC2.84□□□□□ -1.95
P20040 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
P20040 CT009764.1-201ENSMUST00000222260 483 ntBASIC2.84□□□□□ -1.95
P20040 CT571268.1-201ENSMUST00000222320 407 ntBASIC2.84□□□□□ -1.95
P20040 AC174797.3-202ENSMUST00000224578 587 ntBASIC2.84□□□□□ -1.95
P20040 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.84□□□□□ -1.95
P20040 CT009604.2-201ENSMUST00000225531 377 ntBASIC2.84□□□□□ -1.95
P20040 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.84□□□□□ -1.95
P20040 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.84□□□□□ -1.95
P20040 AC154424.1-201ENSMUST00000225883 799 ntBASIC2.84□□□□□ -1.95
P20040 AC108416.2-201ENSMUST00000226792 367 ntBASIC2.84□□□□□ -1.95
P20040 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
P20040 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
P20040 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
P20040 Gm23738-201ENSMUST00000082828 171 ntBASIC2.84□□□□□ -1.95
P20040 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
P20040 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.84□□□□□ -1.96
P20040 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.84□□□□□ -1.96
P20040 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
P20040 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.84□□□□□ -1.96
P20040 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
P20040 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
P20040 Gm12149-201ENSMUST00000117511 654 ntBASIC2.83□□□□□ -1.96
P20040 Gm6762-201ENSMUST00000121769 289 ntBASIC2.83□□□□□ -1.96
P20040 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC2.83□□□□□ -1.96
P20040 Nron-204ENSMUST00000158971 370 ntBASIC2.83□□□□□ -1.96
P20040 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC2.83□□□□□ -1.96
P20040 Gm23053-201ENSMUST00000175136 96 ntBASIC2.83□□□□□ -1.96
P20040 Gm27999-201ENSMUST00000183539 193 ntBASIC2.83□□□□□ -1.96
P20040 Mir7047-201ENSMUST00000184595 64 ntBASIC2.83□□□□□ -1.96
P20040 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC2.83□□□□□ -1.96
P20040 Gm43489-201ENSMUST00000196810 993 ntBASIC2.83□□□□□ -1.96
P20040 Gm42828-201ENSMUST00000199669 469 ntBASIC2.83□□□□□ -1.96
P20040 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC2.83□□□□□ -1.96
P20040 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC2.83□□□□□ -1.96
P20040 Gm36776-201ENSMUST00000207006 203 ntBASIC2.83□□□□□ -1.96
P20040 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.83□□□□□ -1.96
P20040 AC134596.2-201ENSMUST00000222158 171 ntBASIC2.83□□□□□ -1.96
P20040 AC154552.5-201ENSMUST00000222352 207 ntBASIC2.83□□□□□ -1.96
P20040 CT030184.1-201ENSMUST00000222393 416 ntBASIC2.83□□□□□ -1.96
P20040 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.83□□□□□ -1.96
P20040 AC125523.1-201ENSMUST00000228018 934 ntBASIC2.83□□□□□ -1.96
P20040 AC098719.1-201ENSMUST00000228920 371 ntBASIC2.83□□□□□ -1.96
P20040 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
P20040 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
P20040 Gm22739-201ENSMUST00000083437 160 ntBASIC2.83□□□□□ -1.96
P20040 Gm7905-201ENSMUST00000119933 1386 ntBASIC2.83□□□□□ -1.96
P20040 Gm6221-201ENSMUST00000180064 1386 ntBASIC2.83□□□□□ -1.96
P20040 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC2.83□□□□□ -1.96
P20040 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
P20040 Gm42870-201ENSMUST00000199355 3470 ntBASIC2.83□□□□□ -1.96
P20040 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
P20040 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC2.82□□□□□ -1.96
P20040 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.82□□□□□ -1.96
P20040 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
P20040 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
P20040 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
P20040 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
P20040 Gm12805-201ENSMUST00000117305 1048 ntBASIC2.82□□□□□ -1.96
P20040 Gm6274-201ENSMUST00000118173 797 ntBASIC2.82□□□□□ -1.96
P20040 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.82□□□□□ -1.96
P20040 Gm15142-201ENSMUST00000121013 856 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms