Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm19987-201ENSMUST00000216339 499 ntBASIC3.47□□□□□ -1.85
Lire1P11260 Gm3829-201ENSMUST00000222362 619 ntBASIC3.47□□□□□ -1.85
Lire1P11260 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.47□□□□□ -1.85
Lire1P11260 AC109172.1-201ENSMUST00000227503 187 ntBASIC3.47□□□□□ -1.85
Lire1P11260 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.47□□□□□ -1.85
Lire1P11260 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Lire1P11260 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Lire1P11260 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Lire1P11260 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Lire1P11260 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Lire1P11260 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Lire1P11260 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
Lire1P11260 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
Lire1P11260 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.46□□□□□ -1.85
Lire1P11260 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
Lire1P11260 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Lire1P11260 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Lire1P11260 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Mir693-201ENSMUST00000102187 89 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Gm25213-201ENSMUST00000102388 113 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Lire1P11260 Gm15994-201ENSMUST00000118029 402 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Gm14918-201ENSMUST00000118153 268 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Gm13751-201ENSMUST00000120280 752 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Gm11582-201ENSMUST00000121041 236 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Gm25105-201ENSMUST00000122477 130 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Gm24840-201ENSMUST00000122603 147 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Gm23470-201ENSMUST00000157129 120 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Gm22755-201ENSMUST00000157143 100 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Gm24959-201ENSMUST00000157924 146 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Gm22889-201ENSMUST00000158639 58 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Gm18448-201ENSMUST00000186286 599 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Gm29598-201ENSMUST00000188996 588 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Lire1P11260 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Lire1P11260 Gm38281-201ENSMUST00000192301 315 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Gm7299-201ENSMUST00000194441 581 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Trav12-4-201ENSMUST00000200663 271 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Lire1P11260 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
Lire1P11260 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
Lire1P11260 LOC667541-201ENSMUST00000223408 278 ntBASIC3.46□□□□□ -1.86
Lire1P11260 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Lire1P11260 Gm23736-201ENSMUST00000082553 75 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Lire1P11260 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.46□□□□□ -1.86
Lire1P11260 Gm15975-201ENSMUST00000122385 1402 ntBASIC3.45□□□□□ -1.86
Lire1P11260 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Lire1P11260 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Lire1P11260 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Lire1P11260 Gm9850-201ENSMUST00000117916 227 ntBASIC3.45□□□□□ -1.86
Lire1P11260 Gm11923-201ENSMUST00000118135 508 ntBASIC3.45□□□□□ -1.86
Lire1P11260 Gm14599-201ENSMUST00000120469 474 ntBASIC3.45□□□□□ -1.86
Lire1P11260 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.45□□□□□ -1.86
Lire1P11260 Gm14411-201ENSMUST00000121798 914 ntBASIC3.45□□□□□ -1.86
Lire1P11260 Gm11403-201ENSMUST00000122195 369 ntBASIC3.45□□□□□ -1.86
Lire1P11260 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Lire1P11260 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.45□□□□□ -1.86
Lire1P11260 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.45□□□□□ -1.86
Lire1P11260 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.45□□□□□ -1.86
Lire1P11260 Gm2862-201ENSMUST00000161524 328 ntBASIC3.45□□□□□ -1.86
Lire1P11260 Gm17061-201ENSMUST00000163167 499 ntBASIC3.45□□□□□ -1.86
Lire1P11260 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Lire1P11260 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Lire1P11260 Mir6405-201ENSMUST00000184584 124 ntBASIC3.45□□□□□ -1.86
Lire1P11260 Gm27520-201ENSMUST00000184872 81 ntBASIC3.45□□□□□ -1.86
Lire1P11260 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.45□□□□□ -1.86
Lire1P11260 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Lire1P11260 Gm44099-201ENSMUST00000203299 112 ntBASIC3.45□□□□□ -1.86
Lire1P11260 Gm8745-201ENSMUST00000207846 782 ntBASIC3.45□□□□□ -1.86
Lire1P11260 Gm18414-201ENSMUST00000210858 694 ntBASIC3.45□□□□□ -1.86
Lire1P11260 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC3.45□□□□□ -1.86
Lire1P11260 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.45□□□□□ -1.86
Lire1P11260 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Lire1P11260 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Lire1P11260 Snora7a-201ENSMUST00000082629 140 ntBASIC3.45□□□□□ -1.86
Lire1P11260 Gm25200-201ENSMUST00000083094 130 ntBASIC3.45□□□□□ -1.86
Lire1P11260 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Lire1P11260 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.45□□□□□ -1.86
Lire1P11260 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Lire1P11260 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Lire1P11260 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Lire1P11260 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Lire1P11260 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.44□□□□□ -1.86
Lire1P11260 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
Lire1P11260 Gm43092-201ENSMUST00000202986 1854 ntBASIC3.44□□□□□ -1.86
Lire1P11260 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Lire1P11260 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.44□□□□□ -1.86
Lire1P11260 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Lire1P11260 Gm25272-201ENSMUST00000104293 128 ntBASIC3.44□□□□□ -1.86
Lire1P11260 Gm12897-201ENSMUST00000120341 250 ntBASIC3.44□□□□□ -1.86
Lire1P11260 Gm12876-201ENSMUST00000120975 408 ntBASIC3.44□□□□□ -1.86
Lire1P11260 Gm11645-201ENSMUST00000121589 649 ntBASIC3.44□□□□□ -1.86
Lire1P11260 Gm13852-201ENSMUST00000122350 242 ntBASIC3.44□□□□□ -1.86
Lire1P11260 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms