Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm28390-201ENSMUST00000185212 700 ntBASIC3.19□□□□□ -1.9
Chmp6P0C0A3 Gm32447-201ENSMUST00000194265 697 ntBASIC3.19□□□□□ -1.9
Chmp6P0C0A3 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC3.19□□□□□ -1.9
Chmp6P0C0A3 Gm44585-201ENSMUST00000207150 607 ntBASIC3.19□□□□□ -1.9
Chmp6P0C0A3 Gm44656-201ENSMUST00000208428 490 ntBASIC3.19□□□□□ -1.9
Chmp6P0C0A3 AC152979.4-201ENSMUST00000219893 379 ntBASIC3.19□□□□□ -1.9
Chmp6P0C0A3 Gm30738-201ENSMUST00000221346 502 ntBASIC3.19□□□□□ -1.9
Chmp6P0C0A3 AC160114.1-201ENSMUST00000221930 365 ntBASIC3.19□□□□□ -1.9
Chmp6P0C0A3 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Chmp6P0C0A3 Gm23850-201ENSMUST00000083830 169 ntBASIC3.19□□□□□ -1.9
Chmp6P0C0A3 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Chmp6P0C0A3 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Gm12954-201ENSMUST00000118610 611 ntBASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Gm25360-201ENSMUST00000178786 191 ntBASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Gm27249-201ENSMUST00000185049 328 ntBASIC3.18□□□□□ -1.9
Chmp6P0C0A3 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Gm28628-201ENSMUST00000187006 264 ntBASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Gm28629-201ENSMUST00000187309 263 ntBASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Gm5268-201ENSMUST00000189212 940 ntBASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Npn2-202ENSMUST00000189275 235 ntBASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.18□□□□□ -1.9
Chmp6P0C0A3 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Gm43930-201ENSMUST00000203868 845 ntBASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Gm35262-201ENSMUST00000215133 267 ntBASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Gm18557-201ENSMUST00000218710 433 ntBASIC3.18□□□□□ -1.9
Chmp6P0C0A3 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC3.18□□□□□ -1.9
Chmp6P0C0A3 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.18□□□□□ -1.9
Chmp6P0C0A3 CT571256.1-201ENSMUST00000226045 585 ntBASIC3.18□□□□□ -1.9
Chmp6P0C0A3 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Chmp6P0C0A3 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Mir599-201ENSMUST00000102378 88 ntBASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Gm7123-201ENSMUST00000117647 213 ntBASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Gm9850-201ENSMUST00000117916 227 ntBASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Gm9119-201ENSMUST00000118866 495 ntBASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Gm15037-201ENSMUST00000120358 259 ntBASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Gm16445-201ENSMUST00000120399 714 ntBASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Gm14804-201ENSMUST00000122322 508 ntBASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Gm3370-201ENSMUST00000171785 500 ntBASIC3.17□□□□□ -1.9
Chmp6P0C0A3 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Gm26928-201ENSMUST00000182674 572 ntBASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Gm29747-201ENSMUST00000194764 585 ntBASIC3.17□□□□□ -1.9
Chmp6P0C0A3 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Gm43407-201ENSMUST00000199816 317 ntBASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Gm43393-201ENSMUST00000200147 194 ntBASIC3.17□□□□□ -1.9
Chmp6P0C0A3 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Gm18598-201ENSMUST00000207724 597 ntBASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Gm18015-201ENSMUST00000214879 316 ntBASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.17□□□□□ -1.9
Chmp6P0C0A3 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Chmp6P0C0A3 AC121960.3-201ENSMUST00000227077 623 ntBASIC3.17□□□□□ -1.9
Chmp6P0C0A3 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Mir184-201ENSMUST00000083662 69 ntBASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Gm5583-201ENSMUST00000174328 1519 ntBASIC3.17□□□□□ -1.9
Chmp6P0C0A3 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Gm12492-201ENSMUST00000117665 564 ntBASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Gm12889-201ENSMUST00000118684 241 ntBASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Gm11429-201ENSMUST00000119089 144 ntBASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Gm15193-201ENSMUST00000120224 865 ntBASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Gm23213-201ENSMUST00000122715 313 ntBASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Gm7582-201ENSMUST00000160831 603 ntBASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Gm35931-201ENSMUST00000203931 448 ntBASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Gm18645-201ENSMUST00000209593 651 ntBASIC3.16□□□□□ -1.9
Chmp6P0C0A3 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.16□□□□□ -1.9
Chmp6P0C0A3 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.15□□□□□ -1.9
Chmp6P0C0A3 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Chmp6P0C0A3 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Chmp6P0C0A3 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms