Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm25421-201ENSMUST00000104218 164 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 Gm14304-201ENSMUST00000117272 446 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Gm11367-201ENSMUST00000117802 120 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 Gm11826-201ENSMUST00000118781 438 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 Gm12650-201ENSMUST00000121966 258 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 Gm24940-201ENSMUST00000158326 108 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 Gm28353-201ENSMUST00000186482 570 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 Gm2325-201ENSMUST00000186637 581 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 Gm28533-201ENSMUST00000186741 570 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 Gm28623-201ENSMUST00000187219 192 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 Gm6137-201ENSMUST00000187552 578 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 Gm37636-201ENSMUST00000193583 359 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Gm44132-201ENSMUST00000205142 151 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 Gm44208-201ENSMUST00000205199 421 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Gm45907-201ENSMUST00000213023 193 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 AC105958.2-201ENSMUST00000214167 191 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Gm4012-201ENSMUST00000221504 581 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 CT025579.3-201ENSMUST00000224543 451 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 Gm9818-201ENSMUST00000050900 255 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 Gm22062-201ENSMUST00000082563 107 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hoxd3P09027 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Hoxd3P09027 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hoxd3P09027 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hoxd3P09027 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Hoxd3P09027 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxd3P09027 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxd3P09027 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC4.32□□□□□ -1.72
Hoxd3P09027 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Hoxd3P09027 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Hoxd3P09027 Mir147-201ENSMUST00000102354 79 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm24230-201ENSMUST00000104313 129 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm14894-201ENSMUST00000117170 270 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm15400-201ENSMUST00000118944 601 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm13210-201ENSMUST00000121483 273 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm11931-201ENSMUST00000121630 447 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm15065-201ENSMUST00000121699 273 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm22321-201ENSMUST00000157152 104 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm25637-201ENSMUST00000157529 107 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm26172-201ENSMUST00000158421 134 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm25716-201ENSMUST00000158628 104 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm17152-201ENSMUST00000172430 535 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Mir5129-201ENSMUST00000174938 78 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Mir6539-201ENSMUST00000183732 110 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm28389-201ENSMUST00000190090 697 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm37449-201ENSMUST00000193016 270 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm37617-201ENSMUST00000194309 159 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm18658-201ENSMUST00000195558 270 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm43078-201ENSMUST00000197222 168 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm44776-201ENSMUST00000207212 381 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC4.32□□□□□ -1.72
Hoxd3P09027 AC192091.2-201ENSMUST00000217869 117 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm7065-201ENSMUST00000222150 474 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm7808-201ENSMUST00000082002 387 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm25682-201ENSMUST00000083942 164 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 n-R5s46-201ENSMUST00000083960 116 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Hoxd3P09027 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Hoxd3P09027 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxd3P09027 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Hoxd3P09027 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxd3P09027 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxd3P09027 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxd3P09027 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm43175-201ENSMUST00000198450 3810 ntBASIC4.32□□□□□ -1.72
Hoxd3P09027 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxd3P09027 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxd3P09027 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Hoxd3P09027 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxd3P09027 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxd3P09027 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC4.32□□□□□ -1.72
Hoxd3P09027 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxd3P09027 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 112.8 ms