Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Gm27522-201ENSMUST00000183949 230 ntBASIC4.45□□□□□ -1.7
NefmP08553 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC4.45□□□□□ -1.7
NefmP08553 Gm43541-201ENSMUST00000197208 581 ntBASIC4.45□□□□□ -1.7
NefmP08553 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC4.45□□□□□ -1.7
NefmP08553 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NefmP08553 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC4.45□□□□□ -1.7
NefmP08553 Gm45023-201ENSMUST00000207951 379 ntBASIC4.45□□□□□ -1.7
NefmP08553 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NefmP08553 Gm45965-201ENSMUST00000221192 1284 ntBASIC4.45□□□□□ -1.7
NefmP08553 AC115735.1-201ENSMUST00000226633 350 ntBASIC4.45□□□□□ -1.7
NefmP08553 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NefmP08553 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC4.45□□□□□ -1.7
NefmP08553 Gm44049-201ENSMUST00000204905 2984 ntBASIC4.45□□□□□ -1.7
NefmP08553 Gm20345-201ENSMUST00000175839 2414 ntBASIC4.45□□□□□ -1.7
NefmP08553 Gm44562-201ENSMUST00000207194 1347 ntBASIC4.45□□□□□ -1.7
NefmP08553 AC153881.3-201ENSMUST00000218494 1561 ntBASIC4.44□□□□□ -1.7
NefmP08553 Gm24119-201ENSMUST00000103979 246 ntBASIC4.44□□□□□ -1.7
NefmP08553 Gm22543-201ENSMUST00000104347 94 ntBASIC4.44□□□□□ -1.7
NefmP08553 Gm13076-201ENSMUST00000118041 204 ntBASIC4.44□□□□□ -1.7
NefmP08553 Gm25835-201ENSMUST00000158917 144 ntBASIC4.44□□□□□ -1.7
NefmP08553 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC4.44□□□□□ -1.7
NefmP08553 Gm3025-201ENSMUST00000163454 489 ntBASIC4.44□□□□□ -1.7
NefmP08553 Gm2878-201ENSMUST00000170173 486 ntBASIC4.44□□□□□ -1.7
NefmP08553 Mir5123-201ENSMUST00000177794 83 ntBASIC4.44□□□□□ -1.7
NefmP08553 Gm27374-201ENSMUST00000183660 81 ntBASIC4.44□□□□□ -1.7
NefmP08553 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NefmP08553 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC4.44□□□□□ -1.7
NefmP08553 Gm43405-201ENSMUST00000198642 337 ntBASIC4.44□□□□□ -1.7
NefmP08553 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NefmP08553 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC4.44□□□□□ -1.7
NefmP08553 AC167669.3-201ENSMUST00000224720 393 ntBASIC4.44□□□□□ -1.7
NefmP08553 Vmn1r89-206ENSMUST00000227319 985 ntBASIC4.44□□□□□ -1.7
NefmP08553 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NefmP08553 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
NefmP08553 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
NefmP08553 Gm7648-201ENSMUST00000173036 1658 ntBASIC4.43□□□□□ -1.7
NefmP08553 Gm6913-201ENSMUST00000100019 348 ntBASIC4.43□□□□□ -1.7
NefmP08553 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NefmP08553 Gm26349-201ENSMUST00000157530 130 ntBASIC4.43□□□□□ -1.7
NefmP08553 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC4.43□□□□□ -1.7
NefmP08553 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC4.43□□□□□ -1.7
NefmP08553 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC4.43□□□□□ -1.7
NefmP08553 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NefmP08553 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC4.43□□□□□ -1.7
NefmP08553 Gm27700-201ENSMUST00000185003 81 ntBASIC4.43□□□□□ -1.7
NefmP08553 Gm29389-201ENSMUST00000191562 352 ntBASIC4.43□□□□□ -1.7
NefmP08553 Gm43746-201ENSMUST00000200028 317 ntBASIC4.43□□□□□ -1.7
NefmP08553 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC4.43□□□□□ -1.7
NefmP08553 AC164116.2-201ENSMUST00000225398 1038 ntBASIC4.43□□□□□ -1.7
NefmP08553 AC160550.3-201ENSMUST00000226818 400 ntBASIC4.43□□□□□ -1.7
NefmP08553 AC118639.1-201ENSMUST00000227204 338 ntBASIC4.43□□□□□ -1.7
NefmP08553 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NefmP08553 Gm23452-201ENSMUST00000083327 107 ntBASIC4.43□□□□□ -1.7
NefmP08553 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NefmP08553 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NefmP08553 AC152159.1-201ENSMUST00000226719 2769 ntBASIC4.42□□□□□ -1.7
NefmP08553 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
NefmP08553 Gm11356-201ENSMUST00000118974 192 ntBASIC4.42□□□□□ -1.7
NefmP08553 Gm11829-201ENSMUST00000121003 282 ntBASIC4.42□□□□□ -1.7
NefmP08553 Gm22960-201ENSMUST00000122517 104 ntBASIC4.42□□□□□ -1.7
NefmP08553 Gm26020-201ENSMUST00000122729 183 ntBASIC4.42□□□□□ -1.7
NefmP08553 Mup-ps4-201ENSMUST00000151005 539 ntBASIC4.42□□□□□ -1.7
NefmP08553 Gm24008-201ENSMUST00000157733 138 ntBASIC4.42□□□□□ -1.7
NefmP08553 Gm28146-201ENSMUST00000185517 701 ntBASIC4.42□□□□□ -1.7
NefmP08553 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC4.42□□□□□ -1.7
NefmP08553 Gm9931-201ENSMUST00000193584 1185 ntBASIC4.42□□□□□ -1.7
NefmP08553 Gm37523-201ENSMUST00000194901 412 ntBASIC4.42□□□□□ -1.7
NefmP08553 Gm44718-201ENSMUST00000206886 359 ntBASIC4.42□□□□□ -1.7
NefmP08553 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NefmP08553 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NefmP08553 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NefmP08553 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NefmP08553 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC4.41□□□□□ -1.7
NefmP08553 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
NefmP08553 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NefmP08553 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NefmP08553 Gm14981-201ENSMUST00000117325 943 ntBASIC4.41□□□□□ -1.7
NefmP08553 Gm11253-201ENSMUST00000118486 201 ntBASIC4.41□□□□□ -1.7
NefmP08553 Gm14599-201ENSMUST00000120469 474 ntBASIC4.41□□□□□ -1.7
NefmP08553 Gm11252-201ENSMUST00000120572 939 ntBASIC4.41□□□□□ -1.7
NefmP08553 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC4.41□□□□□ -1.7
NefmP08553 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC4.41□□□□□ -1.7
NefmP08553 Gm25224-201ENSMUST00000158195 68 ntBASIC4.41□□□□□ -1.7
NefmP08553 Gm7582-201ENSMUST00000160831 603 ntBASIC4.41□□□□□ -1.7
NefmP08553 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NefmP08553 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NefmP08553 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NefmP08553 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NefmP08553 Spin2g-201ENSMUST00000178425 687 ntBASIC4.41□□□□□ -1.7
NefmP08553 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC4.41□□□□□ -1.7
NefmP08553 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NefmP08553 Gm43384-201ENSMUST00000200569 637 ntBASIC4.41□□□□□ -1.7
NefmP08553 Gm43531-201ENSMUST00000200676 1114 ntBASIC4.41□□□□□ -1.7
NefmP08553 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC4.41□□□□□ -1.7
NefmP08553 Olfr936-202ENSMUST00000216912 937 ntBASIC4.41□□□□□ -1.7
NefmP08553 Gm18557-201ENSMUST00000218710 433 ntBASIC4.41□□□□□ -1.7
NefmP08553 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NefmP08553 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NefmP08553 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NefmP08553 Gm22043-201ENSMUST00000082993 158 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms