Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
Col3a1P08121 Gm43313-201ENSMUST00000201398 2235 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Gm25647-201ENSMUST00000101832 78 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Gm25823-201ENSMUST00000101995 78 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Mir190b-201ENSMUST00000104803 80 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Gm7974-201ENSMUST00000117154 408 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Col3a1P08121 Gm14901-201ENSMUST00000119001 283 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Gm11606-201ENSMUST00000120706 617 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Gm6373-201ENSMUST00000121026 360 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Col3a1P08121 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Col3a1P08121 Gm24080-201ENSMUST00000175178 232 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Gm24220-201ENSMUST00000177753 79 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Gm25988-201ENSMUST00000177759 79 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Gm23471-201ENSMUST00000177886 79 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Gm26488-201ENSMUST00000178225 79 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Gm23449-201ENSMUST00000179208 79 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Gm25221-201ENSMUST00000180051 79 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Gm5552-201ENSMUST00000197149 515 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Gm45400-201ENSMUST00000211603 653 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Gm19232-201ENSMUST00000211621 652 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 AC154506.3-201ENSMUST00000225417 213 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Col3a1P08121 Gm9762-201ENSMUST00000036976 444 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Col3a1P08121 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Col3a1P08121 Gm14442-201ENSMUST00000119690 1736 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Col3a1P08121 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.87□□□□□ -1.79
Col3a1P08121 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Col3a1P08121 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Col3a1P08121 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Col3a1P08121 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Col3a1P08121 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
Col3a1P08121 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Col3a1P08121 Gm24068-201ENSMUST00000104513 132 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.86□□□□□ -1.79
Col3a1P08121 Gm11410-201ENSMUST00000120053 1143 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Snrpert-201ENSMUST00000121967 279 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm12045-201ENSMUST00000122122 573 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm24517-201ENSMUST00000122560 107 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm26477-201ENSMUST00000122617 323 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC3.86□□□□□ -1.79
Col3a1P08121 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.86□□□□□ -1.79
Col3a1P08121 Gm22390-201ENSMUST00000157588 325 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.86□□□□□ -1.79
Col3a1P08121 Gm17159-201ENSMUST00000169043 482 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm18522-201ENSMUST00000173947 650 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm20612-201ENSMUST00000176318 236 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Col3a1P08121 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC3.86□□□□□ -1.79
Col3a1P08121 Gm43096-201ENSMUST00000196173 421 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm43655-201ENSMUST00000197367 222 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Igkv13-82-201ENSMUST00000200308 346 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Col3a1P08121 AC091260.1-201ENSMUST00000216112 229 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC3.86□□□□□ -1.79
Col3a1P08121 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm23136-201ENSMUST00000083425 99 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Col3a1P08121 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Col3a1P08121 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Col3a1P08121 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Col3a1P08121 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Col3a1P08121 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC3.86□□□□□ -1.79
Col3a1P08121 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm12222-201ENSMUST00000121368 260 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm23212-201ENSMUST00000122718 60 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm26041-201ENSMUST00000158148 108 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm16236-201ENSMUST00000159588 379 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.86□□□□□ -1.79
Col3a1P08121 Gm9541-201ENSMUST00000188409 502 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.86□□□□□ -1.79
Col3a1P08121 Gm44972-201ENSMUST00000206419 406 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC3.86□□□□□ -1.79
Col3a1P08121 Gm30534-201ENSMUST00000217928 207 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC3.86□□□□□ -1.79
Col3a1P08121 Gm30738-201ENSMUST00000221346 502 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 AC165146.1-201ENSMUST00000223777 900 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 AC160930.1-201ENSMUST00000227194 337 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Col3a1P08121 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Col3a1P08121 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Col3a1P08121 Gm22249-201ENSMUST00000082485 136 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm25404-201ENSMUST00000082970 107 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm24268-201ENSMUST00000082990 110 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm22444-201ENSMUST00000093693 108 ntBASIC3.86□□□□□ -1.79
Col3a1P08121 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.85□□□□□ -1.79
Col3a1P08121 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col3a1P08121 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
Col3a1P08121 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms