Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Vti1aO89116 Gm12255-201ENSMUST00000117184 284 ntBASIC4.99□□□□□ -1.61
Vti1aO89116 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Vti1aO89116 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.99□□□□□ -1.61
Vti1aO89116 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Vti1aO89116 Gm23905-201ENSMUST00000157568 109 ntBASIC4.99□□□□□ -1.61
Vti1aO89116 Gm17148-201ENSMUST00000164702 249 ntBASIC4.99□□□□□ -1.61
Vti1aO89116 Gm7925-201ENSMUST00000166690 401 ntBASIC4.99□□□□□ -1.61
Vti1aO89116 Gm20673-201ENSMUST00000177167 430 ntBASIC4.99□□□□□ -1.61
Vti1aO89116 Gm22395-201ENSMUST00000177427 96 ntBASIC4.99□□□□□ -1.61
Vti1aO89116 Gm4854-201ENSMUST00000185902 574 ntBASIC4.99□□□□□ -1.61
Vti1aO89116 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC4.99□□□□□ -1.61
Vti1aO89116 Gm43828-201ENSMUST00000196890 639 ntBASIC4.99□□□□□ -1.61
Vti1aO89116 Gm42579-201ENSMUST00000200512 734 ntBASIC4.99□□□□□ -1.61
Vti1aO89116 Gm44161-201ENSMUST00000203532 253 ntBASIC4.99□□□□□ -1.61
Vti1aO89116 Gm44794-201ENSMUST00000206550 411 ntBASIC4.99□□□□□ -1.61
Vti1aO89116 Gm18462-201ENSMUST00000208112 417 ntBASIC4.99□□□□□ -1.61
Vti1aO89116 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Vti1aO89116 Gm18258-201ENSMUST00000210413 542 ntBASIC4.99□□□□□ -1.61
Vti1aO89116 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC4.99□□□□□ -1.61
Vti1aO89116 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.99□□□□□ -1.61
Vti1aO89116 AC160016.1-201ENSMUST00000215589 448 ntBASIC4.99□□□□□ -1.61
Vti1aO89116 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Vti1aO89116 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.99□□□□□ -1.61
Vti1aO89116 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Vti1aO89116 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Vti1aO89116 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Vti1aO89116 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Vti1aO89116 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Vti1aO89116 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Vti1aO89116 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Vti1aO89116 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Vti1aO89116 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Vti1aO89116 Gm24951-201ENSMUST00000102182 109 ntBASIC4.98□□□□□ -1.61
Vti1aO89116 Gm5757-201ENSMUST00000117494 528 ntBASIC4.98□□□□□ -1.61
Vti1aO89116 Gm11408-201ENSMUST00000117889 519 ntBASIC4.98□□□□□ -1.61
Vti1aO89116 Gm14067-201ENSMUST00000119340 314 ntBASIC4.98□□□□□ -1.61
Vti1aO89116 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.98□□□□□ -1.61
Vti1aO89116 Gm23411-201ENSMUST00000157988 62 ntBASIC4.98□□□□□ -1.61
Vti1aO89116 Gm22085-201ENSMUST00000158344 110 ntBASIC4.98□□□□□ -1.61
Vti1aO89116 Gm26746-201ENSMUST00000181722 487 ntBASIC4.98□□□□□ -1.61
Vti1aO89116 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.98□□□□□ -1.61
Vti1aO89116 Gm28660-201ENSMUST00000186496 253 ntBASIC4.98□□□□□ -1.61
Vti1aO89116 Gm44474-201ENSMUST00000196525 127 ntBASIC4.98□□□□□ -1.61
Vti1aO89116 Gm17951-201ENSMUST00000198536 496 ntBASIC4.98□□□□□ -1.61
Vti1aO89116 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Vti1aO89116 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC4.98□□□□□ -1.61
Vti1aO89116 Gm44779-201ENSMUST00000206937 708 ntBASIC4.98□□□□□ -1.61
Vti1aO89116 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.98□□□□□ -1.61
Vti1aO89116 Gm17989-201ENSMUST00000211543 412 ntBASIC4.98□□□□□ -1.61
Vti1aO89116 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.98□□□□□ -1.61
Vti1aO89116 Gm2059-201ENSMUST00000212025 287 ntBASIC4.98□□□□□ -1.61
Vti1aO89116 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Vti1aO89116 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.98□□□□□ -1.61
Vti1aO89116 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.98□□□□□ -1.61
Vti1aO89116 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.98□□□□□ -1.61
Vti1aO89116 Gm25140-201ENSMUST00000083254 140 ntBASIC4.98□□□□□ -1.61
Vti1aO89116 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.98□□□□□ -1.61
Vti1aO89116 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.98□□□□□ -1.61
Vti1aO89116 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC4.98□□□□□ -1.61
Vti1aO89116 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Vti1aO89116 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Vti1aO89116 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Vti1aO89116 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Vti1aO89116 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Vti1aO89116 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Vti1aO89116 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Mir761-201ENSMUST00000103245 76 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Gm26156-201ENSMUST00000116999 123 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Gm12149-201ENSMUST00000117511 654 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Gm13932-201ENSMUST00000120873 610 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Gm5123-201ENSMUST00000121905 837 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Vti1aO89116 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.97□□□□□ -1.61
Vti1aO89116 Gm12226-201ENSMUST00000144172 876 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Gm5755-201ENSMUST00000152394 837 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Gm24751-201ENSMUST00000157844 102 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Vti1aO89116 Gm21726-201ENSMUST00000179654 392 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Gm26866-201ENSMUST00000180414 802 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Gm26701-201ENSMUST00000181571 234 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Gm28399-201ENSMUST00000186221 318 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Gm28572-201ENSMUST00000187444 318 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Gm29365-201ENSMUST00000189461 699 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Gm28408-201ENSMUST00000191557 463 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Vti1aO89116 Gm5322-201ENSMUST00000206142 699 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Gm20039-201ENSMUST00000210329 394 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Gm7692-201ENSMUST00000213534 409 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Gm46193-201ENSMUST00000219399 364 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.97□□□□□ -1.61
Vti1aO89116 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Vti1aO89116 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Vti1aO89116 Snord42a-201ENSMUST00000082606 65 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Gm23300-201ENSMUST00000082712 125 ntBASIC4.97□□□□□ -1.61
Vti1aO89116 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Vti1aO89116 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 121.8 ms