Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm28623-201ENSMUST00000187219 192 ntBASIC2.7□□□□□ -1.98
CopeO89079 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.7□□□□□ -1.98
CopeO89079 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC2.7□□□□□ -1.98
CopeO89079 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC2.7□□□□□ -1.98
CopeO89079 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CopeO89079 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CopeO89079 AC129202.3-201ENSMUST00000224413 733 ntBASIC2.7□□□□□ -1.98
CopeO89079 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CopeO89079 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CopeO89079 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CopeO89079 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
CopeO89079 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CopeO89079 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CopeO89079 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.69□□□□□ -1.98
CopeO89079 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
CopeO89079 Mir673-201ENSMUST00000102361 91 ntBASIC2.69□□□□□ -1.98
CopeO89079 Snora36b-201ENSMUST00000104383 132 ntBASIC2.69□□□□□ -1.98
CopeO89079 Gm22072-201ENSMUST00000116850 121 ntBASIC2.69□□□□□ -1.98
CopeO89079 Gm11881-201ENSMUST00000119408 572 ntBASIC2.69□□□□□ -1.98
CopeO89079 Gm12213-201ENSMUST00000119924 353 ntBASIC2.69□□□□□ -1.98
CopeO89079 Gm25902-201ENSMUST00000158493 318 ntBASIC2.69□□□□□ -1.98
CopeO89079 Gm20718-201ENSMUST00000176058 259 ntBASIC2.69□□□□□ -1.98
CopeO89079 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC2.69□□□□□ -1.98
CopeO89079 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CopeO89079 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.69□□□□□ -1.98
CopeO89079 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.69□□□□□ -1.98
CopeO89079 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.69□□□□□ -1.98
CopeO89079 Gm27999-201ENSMUST00000183539 193 ntBASIC2.69□□□□□ -1.98
CopeO89079 Mir6353-201ENSMUST00000183596 113 ntBASIC2.69□□□□□ -1.98
CopeO89079 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CopeO89079 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CopeO89079 Gm19641-201ENSMUST00000188432 417 ntBASIC2.69□□□□□ -1.98
CopeO89079 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CopeO89079 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.69□□□□□ -1.98
CopeO89079 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC2.69□□□□□ -1.98
CopeO89079 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC2.69□□□□□ -1.98
CopeO89079 Gm9931-201ENSMUST00000193584 1185 ntBASIC2.69□□□□□ -1.98
CopeO89079 Gm37807-201ENSMUST00000194310 190 ntBASIC2.69□□□□□ -1.98
CopeO89079 Gm44232-201ENSMUST00000204537 225 ntBASIC2.69□□□□□ -1.98
CopeO89079 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.69□□□□□ -1.98
CopeO89079 AC122901.2-201ENSMUST00000216926 285 ntBASIC2.69□□□□□ -1.98
CopeO89079 AC073947.1-201ENSMUST00000216991 649 ntBASIC2.69□□□□□ -1.98
CopeO89079 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.69□□□□□ -1.98
CopeO89079 Gm8942-201ENSMUST00000217892 400 ntBASIC2.69□□□□□ -1.98
CopeO89079 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.69□□□□□ -1.98
CopeO89079 AC154257.2-201ENSMUST00000224166 340 ntBASIC2.69□□□□□ -1.98
CopeO89079 AC107663.3-201ENSMUST00000225873 601 ntBASIC2.69□□□□□ -1.98
CopeO89079 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC2.69□□□□□ -1.98
CopeO89079 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.69□□□□□ -1.98
CopeO89079 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.69□□□□□ -1.98
CopeO89079 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CopeO89079 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CopeO89079 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CopeO89079 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CopeO89079 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CopeO89079 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
CopeO89079 Gm15125-201ENSMUST00000116185 800 ntBASIC2.68□□□□□ -1.98
CopeO89079 Gm14579-201ENSMUST00000117068 283 ntBASIC2.68□□□□□ -1.98
CopeO89079 Gm11221-201ENSMUST00000117230 597 ntBASIC2.68□□□□□ -1.98
CopeO89079 Gm15161-201ENSMUST00000117340 387 ntBASIC2.68□□□□□ -1.98
CopeO89079 Gm14240-201ENSMUST00000120353 546 ntBASIC2.68□□□□□ -1.98
CopeO89079 Mup-ps17-201ENSMUST00000120723 218 ntBASIC2.68□□□□□ -1.98
CopeO89079 Gm23886-201ENSMUST00000122684 313 ntBASIC2.68□□□□□ -1.98
CopeO89079 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CopeO89079 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CopeO89079 Gm6264-202ENSMUST00000162896 1217 ntBASIC2.68□□□□□ -1.98
CopeO89079 Atp2b4-208ENSMUST00000167348 243 ntBASIC2.68□□□□□ -1.98
CopeO89079 Gm17204-201ENSMUST00000167936 478 ntBASIC2.68□□□□□ -1.98
CopeO89079 Gm25412-201ENSMUST00000180258 107 ntBASIC2.68□□□□□ -1.98
CopeO89079 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
CopeO89079 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CopeO89079 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.68□□□□□ -1.98
CopeO89079 AC160970.1-201ENSMUST00000219311 475 ntBASIC2.68□□□□□ -1.98
CopeO89079 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.68□□□□□ -1.98
CopeO89079 AC183096.1-201ENSMUST00000226392 130 ntBASIC2.68□□□□□ -1.98
CopeO89079 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CopeO89079 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CopeO89079 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CopeO89079 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CopeO89079 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CopeO89079 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.67□□□□□ -1.98
CopeO89079 Gm12268-201ENSMUST00000118398 442 ntBASIC2.67□□□□□ -1.98
CopeO89079 Gm11356-201ENSMUST00000118974 192 ntBASIC2.67□□□□□ -1.98
CopeO89079 Gm12755-201ENSMUST00000122297 282 ntBASIC2.67□□□□□ -1.98
CopeO89079 Gm24240-201ENSMUST00000157785 135 ntBASIC2.67□□□□□ -1.98
CopeO89079 Gm26000-201ENSMUST00000157991 107 ntBASIC2.67□□□□□ -1.98
CopeO89079 Gm24854-201ENSMUST00000158025 98 ntBASIC2.67□□□□□ -1.98
CopeO89079 Gm23223-201ENSMUST00000158119 127 ntBASIC2.67□□□□□ -1.98
CopeO89079 Gm24553-201ENSMUST00000158653 131 ntBASIC2.67□□□□□ -1.98
CopeO89079 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CopeO89079 Gm9587-201ENSMUST00000172449 454 ntBASIC2.67□□□□□ -1.98
CopeO89079 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CopeO89079 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CopeO89079 Gm29597-201ENSMUST00000188035 308 ntBASIC2.67□□□□□ -1.98
CopeO89079 Gm37281-201ENSMUST00000192412 439 ntBASIC2.67□□□□□ -1.98
CopeO89079 Gm18748-201ENSMUST00000198507 622 ntBASIC2.67□□□□□ -1.98
CopeO89079 Gm43954-201ENSMUST00000204634 544 ntBASIC2.67□□□□□ -1.98
CopeO89079 CT025552.1-201ENSMUST00000224561 521 ntBASIC2.67□□□□□ -1.98
CopeO89079 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.67□□□□□ -1.98
CopeO89079 AC154730.1-201ENSMUST00000227874 816 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms