Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm22868-201ENSMUST00000083955 164 ntBASIC3.73□□□□□ -1.81
Cbx4O55187 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Cbx4O55187 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Cbx4O55187 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Cbx4O55187 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Cbx4O55187 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.73□□□□□ -1.81
Cbx4O55187 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Cbx4O55187 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Cbx4O55187 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.73□□□□□ -1.81
Cbx4O55187 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.73□□□□□ -1.81
Cbx4O55187 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.72□□□□□ -1.81
Cbx4O55187 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
Cbx4O55187 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Cbx4O55187 Gm14880-201ENSMUST00000117581 292 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Cbx4O55187 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC3.72□□□□□ -1.81
Cbx4O55187 Gm12900-201ENSMUST00000120919 573 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Gm14362-201ENSMUST00000121679 273 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Gm23206-201ENSMUST00000122720 184 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC3.72□□□□□ -1.81
Cbx4O55187 Gm15254-201ENSMUST00000149567 273 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.72□□□□□ -1.81
Cbx4O55187 Gm25058-201ENSMUST00000157365 128 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Gm26148-201ENSMUST00000157430 68 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Gm25706-201ENSMUST00000157828 247 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Gm24961-201ENSMUST00000157918 184 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Gm16290-201ENSMUST00000161175 474 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.72□□□□□ -1.81
Cbx4O55187 Mir5098-201ENSMUST00000175320 82 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Gm24520-201ENSMUST00000179510 110 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.72□□□□□ -1.81
Cbx4O55187 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Cbx4O55187 Gm28283-201ENSMUST00000185509 178 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Gm17946-201ENSMUST00000186856 538 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC3.72□□□□□ -1.81
Cbx4O55187 Gm43026-201ENSMUST00000202972 325 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Gm44099-201ENSMUST00000203299 112 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Cbx4O55187 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Gm44923-201ENSMUST00000206673 85 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Gm2676-201ENSMUST00000207279 606 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.72□□□□□ -1.81
Cbx4O55187 Gm45796-201ENSMUST00000212483 114 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Gm17890-201ENSMUST00000221419 757 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.72□□□□□ -1.81
Cbx4O55187 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Cbx4O55187 Rny3-201ENSMUST00000083011 102 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Mir19a-201ENSMUST00000083482 82 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Cbx4O55187 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.72□□□□□ -1.81
Cbx4O55187 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Cbx4O55187 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.72□□□□□ -1.81
Cbx4O55187 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Cbx4O55187 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Cbx4O55187 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Cbx4O55187 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Cbx4O55187 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
Cbx4O55187 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
Cbx4O55187 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Cbx4O55187 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Cbx4O55187 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Cbx4O55187 Mir92b-201ENSMUST00000102300 83 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Cbx4O55187 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Cbx4O55187 Gm13614-201ENSMUST00000117306 503 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 Gm14469-201ENSMUST00000118363 202 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.71□□□□□ -1.82
Cbx4O55187 Gm23957-201ENSMUST00000157209 90 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 Gm23098-201ENSMUST00000157552 299 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 Gm23585-201ENSMUST00000157656 102 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 Gm25666-201ENSMUST00000157702 107 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 Gm22889-201ENSMUST00000158639 58 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Cbx4O55187 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 Gm27313-201ENSMUST00000183500 142 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 Gm7654-201ENSMUST00000186738 683 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 Gm28404-201ENSMUST00000190242 453 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 Gm19694-201ENSMUST00000192364 505 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.71□□□□□ -1.82
Cbx4O55187 Gm37119-201ENSMUST00000195691 389 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.71□□□□□ -1.82
Cbx4O55187 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 AC144628.1-201ENSMUST00000227943 466 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
Cbx4O55187 AC139350.4-201ENSMUST00000228483 798 ntBASIC3.71□□□□□ -1.82
Cbx4O55187 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Cbx4O55187 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Cbx4O55187 Gm25800-201ENSMUST00000082636 134 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms