Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 Snora36b-201ENSMUST00000104383 132 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Hmgb3O54879 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 Gm12902-201ENSMUST00000118389 322 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 Gm14901-201ENSMUST00000119001 283 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 Mup-ps20-201ENSMUST00000121132 389 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 Gm14506-201ENSMUST00000121165 536 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Hmgb3O54879 Gm13131-201ENSMUST00000122228 321 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 Gm23792-201ENSMUST00000122557 93 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 Gm16373-201ENSMUST00000129517 303 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC2.16□□□□□ -2.06
Hmgb3O54879 Gm18520-201ENSMUST00000174783 658 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 Gm7870-201ENSMUST00000184467 616 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 Mir6899-201ENSMUST00000184798 64 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Hmgb3O54879 Gm43295-201ENSMUST00000201439 412 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 Gm44520-201ENSMUST00000205447 802 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.16□□□□□ -2.06
Hmgb3O54879 AC160865.1-201ENSMUST00000219873 151 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 Gm19540-201ENSMUST00000221843 810 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 Gm19786-201ENSMUST00000222589 580 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Hmgb3O54879 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Hmgb3O54879 Gm22507-201ENSMUST00000082773 160 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 Gm24446-201ENSMUST00000083982 156 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
Hmgb3O54879 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Hmgb3O54879 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Hmgb3O54879 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Hmgb3O54879 Gm43201-201ENSMUST00000195925 3416 ntBASIC2.16□□□□□ -2.06
Hmgb3O54879 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm25420-201ENSMUST00000104216 127 ntBASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm24280-201ENSMUST00000104237 134 ntBASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm6274-201ENSMUST00000118173 797 ntBASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm5937-201ENSMUST00000119715 643 ntBASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm14739-201ENSMUST00000120424 802 ntBASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm15272-201ENSMUST00000120865 233 ntBASIC2.15□□□□□ -2.07
Hmgb3O54879 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm22059-201ENSMUST00000157544 104 ntBASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm22917-201ENSMUST00000180116 110 ntBASIC2.15□□□□□ -2.07
Hmgb3O54879 Mir6986-201ENSMUST00000184483 58 ntBASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm21489-201ENSMUST00000189668 818 ntBASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm32381-201ENSMUST00000203192 476 ntBASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm45078-201ENSMUST00000205343 546 ntBASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm44555-201ENSMUST00000209008 148 ntBASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm45687-201ENSMUST00000209454 155 ntBASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.15□□□□□ -2.07
Hmgb3O54879 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm8681-201ENSMUST00000219115 618 ntBASIC2.15□□□□□ -2.07
Hmgb3O54879 AC160114.1-201ENSMUST00000221930 365 ntBASIC2.15□□□□□ -2.07
Hmgb3O54879 AC155305.1-201ENSMUST00000222207 319 ntBASIC2.15□□□□□ -2.07
Hmgb3O54879 AC159293.2-201ENSMUST00000222289 424 ntBASIC2.15□□□□□ -2.07
Hmgb3O54879 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.15□□□□□ -2.07
Hmgb3O54879 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Hmgb3O54879 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Hmgb3O54879 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.15□□□□□ -2.07
Hmgb3O54879 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Hmgb3O54879 Gm42701-201ENSMUST00000196117 1657 ntBASIC2.15□□□□□ -2.07
Hmgb3O54879 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Hmgb3O54879 Gm38278-201ENSMUST00000194715 1365 ntBASIC2.14□□□□□ -2.07
Hmgb3O54879 Gm42479-201ENSMUST00000198654 1356 ntBASIC2.14□□□□□ -2.07
Hmgb3O54879 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.14□□□□□ -2.07
Hmgb3O54879 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Hmgb3O54879 Gm26154-201ENSMUST00000102339 96 ntBASIC2.14□□□□□ -2.07
Hmgb3O54879 Gm16400-201ENSMUST00000116523 1029 ntBASIC2.14□□□□□ -2.07
Hmgb3O54879 Gm14579-201ENSMUST00000117068 283 ntBASIC2.14□□□□□ -2.07
Hmgb3O54879 Gm14534-201ENSMUST00000120045 357 ntBASIC2.14□□□□□ -2.07
Hmgb3O54879 Gm15037-201ENSMUST00000120358 259 ntBASIC2.14□□□□□ -2.07
Hmgb3O54879 Defa-ps12-201ENSMUST00000122353 193 ntBASIC2.14□□□□□ -2.07
Hmgb3O54879 Gm15946-201ENSMUST00000160654 423 ntBASIC2.14□□□□□ -2.07
Hmgb3O54879 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC2.14□□□□□ -2.07
Hmgb3O54879 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.14□□□□□ -2.07
Hmgb3O54879 Gm17166-201ENSMUST00000172006 431 ntBASIC2.14□□□□□ -2.07
Hmgb3O54879 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.14□□□□□ -2.07
Hmgb3O54879 Gm29604-201ENSMUST00000187176 163 ntBASIC2.14□□□□□ -2.07
Hmgb3O54879 Gm32340-201ENSMUST00000192883 259 ntBASIC2.14□□□□□ -2.07
Hmgb3O54879 Gm44476-201ENSMUST00000196225 91 ntBASIC2.14□□□□□ -2.07
Hmgb3O54879 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC2.14□□□□□ -2.07
Hmgb3O54879 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Hmgb3O54879 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.14□□□□□ -2.07
Hmgb3O54879 AC154640.2-201ENSMUST00000226324 472 ntBASIC2.14□□□□□ -2.07
Hmgb3O54879 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.14□□□□□ -2.07
Hmgb3O54879 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.14□□□□□ -2.07
Hmgb3O54879 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Hmgb3O54879 Gm23096-201ENSMUST00000083447 107 ntBASIC2.14□□□□□ -2.07
Hmgb3O54879 Olfr895-201ENSMUST00000093864 951 ntBASIC2.14□□□□□ -2.07
Hmgb3O54879 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Hmgb3O54879 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Hmgb3O54879 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms