Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 AC173481.1-201ENSMUST00000223351 270 ntBASIC2.56□□□□□ -2
Sdc4O35988 AC154184.2-201ENSMUST00000225335 349 ntBASIC2.56□□□□□ -2
Sdc4O35988 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.56□□□□□ -2
Sdc4O35988 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.56□□□□□ -2
Sdc4O35988 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.56□□□□□ -2
Sdc4O35988 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Sdc4O35988 Gm19335-201ENSMUST00000195836 2069 ntBASIC2.56□□□□□ -2
Sdc4O35988 Mir878-201ENSMUST00000104680 78 ntBASIC2.55□□□□□ -2
Sdc4O35988 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Sdc4O35988 Gm15074-201ENSMUST00000117603 936 ntBASIC2.55□□□□□ -2
Sdc4O35988 Gm13756-201ENSMUST00000117618 222 ntBASIC2.55□□□□□ -2
Sdc4O35988 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Sdc4O35988 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Sdc4O35988 Gm24965-201ENSMUST00000157922 106 ntBASIC2.55□□□□□ -2
Sdc4O35988 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.55□□□□□ -2
Sdc4O35988 Gm19200-201ENSMUST00000182579 1001 ntBASIC2.55□□□□□ -2
Sdc4O35988 Gm29597-201ENSMUST00000188035 308 ntBASIC2.55□□□□□ -2
Sdc4O35988 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC2.55□□□□□ -2
Sdc4O35988 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.55□□□□□ -2
Sdc4O35988 Gm42828-201ENSMUST00000199669 469 ntBASIC2.55□□□□□ -2
Sdc4O35988 Gm20946-201ENSMUST00000212367 461 ntBASIC2.55□□□□□ -2
Sdc4O35988 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Sdc4O35988 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.55□□□□□ -2
Sdc4O35988 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.55□□□□□ -2
Sdc4O35988 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC2.55□□□□□ -2
Sdc4O35988 Gm18491-201ENSMUST00000192492 1594 ntBASIC2.54□□□□□ -2
Sdc4O35988 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Sdc4O35988 Gm26341-201ENSMUST00000104561 134 ntBASIC2.54□□□□□ -2
Sdc4O35988 Gm14125-201ENSMUST00000113442 680 ntBASIC2.54□□□□□ -2
Sdc4O35988 Gm12492-201ENSMUST00000117665 564 ntBASIC2.54□□□□□ -2
Sdc4O35988 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.54□□□□□ -2
Sdc4O35988 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.54□□□□□ -2
Sdc4O35988 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC2.54□□□□□ -2
Sdc4O35988 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.54□□□□□ -2
Sdc4O35988 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC2.54□□□□□ -2
Sdc4O35988 Gm16218-201ENSMUST00000155424 388 ntBASIC2.54□□□□□ -2
Sdc4O35988 Gm25863-201ENSMUST00000158249 329 ntBASIC2.54□□□□□ -2
Sdc4O35988 Gm25520-201ENSMUST00000158389 118 ntBASIC2.54□□□□□ -2
Sdc4O35988 Gm8338-201ENSMUST00000163928 363 ntBASIC2.54□□□□□ -2
Sdc4O35988 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.54□□□□□ -2
Sdc4O35988 Gm22646-201ENSMUST00000175130 115 ntBASIC2.54□□□□□ -2
Sdc4O35988 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.54□□□□□ -2
Sdc4O35988 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.54□□□□□ -2
Sdc4O35988 Gm44903-201ENSMUST00000206840 130 ntBASIC2.54□□□□□ -2
Sdc4O35988 Gm8679-201ENSMUST00000210651 1036 ntBASIC2.54□□□□□ -2
Sdc4O35988 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.54□□□□□ -2
Sdc4O35988 Gm5374-201ENSMUST00000222868 657 ntBASIC2.54□□□□□ -2
Sdc4O35988 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.54□□□□□ -2
Sdc4O35988 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.54□□□□□ -2
Sdc4O35988 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.54□□□□□ -2
Sdc4O35988 Gm6030-201ENSMUST00000078768 402 ntBASIC2.54□□□□□ -2
Sdc4O35988 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC2.54□□□□□ -2
Sdc4O35988 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.54□□□□□ -2
Sdc4O35988 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC2.54□□□□□ -2
Sdc4O35988 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Sdc4O35988 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Sdc4O35988 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Sdc4O35988 Gm9785-202ENSMUST00000144563 593 ntBASIC2.53□□□□□ -2
Sdc4O35988 Gm26355-201ENSMUST00000158220 105 ntBASIC2.53□□□□□ -2
Sdc4O35988 Gm22517-201ENSMUST00000158265 136 ntBASIC2.53□□□□□ -2
Sdc4O35988 Gm22766-201ENSMUST00000158372 99 ntBASIC2.53□□□□□ -2
Sdc4O35988 Gm22416-201ENSMUST00000158590 88 ntBASIC2.53□□□□□ -2
Sdc4O35988 Gm25119-201ENSMUST00000158815 88 ntBASIC2.53□□□□□ -2
Sdc4O35988 Gm23005-201ENSMUST00000158950 136 ntBASIC2.53□□□□□ -2
Sdc4O35988 Gm15974-201ENSMUST00000159103 531 ntBASIC2.53□□□□□ -2
Sdc4O35988 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC2.53□□□□□ -2
Sdc4O35988 Gm28637-201ENSMUST00000179424 345 ntBASIC2.53□□□□□ -2
Sdc4O35988 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.53□□□□□ -2
Sdc4O35988 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC2.53□□□□□ -2
Sdc4O35988 Gm38311-201ENSMUST00000192945 165 ntBASIC2.53□□□□□ -2
Sdc4O35988 Gm44403-201ENSMUST00000198554 129 ntBASIC2.53□□□□□ -2
Sdc4O35988 Gm44161-201ENSMUST00000203532 253 ntBASIC2.53□□□□□ -2
Sdc4O35988 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC2.53□□□□□ -2
Sdc4O35988 Gm45013-201ENSMUST00000206883 178 ntBASIC2.53□□□□□ -2
Sdc4O35988 Gm18871-201ENSMUST00000218655 745 ntBASIC2.53□□□□□ -2
Sdc4O35988 Gm7753-201ENSMUST00000221007 867 ntBASIC2.53□□□□□ -2
Sdc4O35988 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.53□□□□□ -2
Sdc4O35988 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.53□□□□□ -2
Sdc4O35988 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.53□□□□□ -2
Sdc4O35988 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.53□□□□□ -2
Sdc4O35988 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.53□□□□□ -2
Sdc4O35988 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2.01
Sdc4O35988 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Sdc4O35988 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Sdc4O35988 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Sdc4O35988 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Sdc4O35988 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Sdc4O35988 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC2.52□□□□□ -2.01
Sdc4O35988 Gm11483-201ENSMUST00000119839 247 ntBASIC2.52□□□□□ -2.01
Sdc4O35988 Gm5392-201ENSMUST00000122189 789 ntBASIC2.52□□□□□ -2.01
Sdc4O35988 Gm23600-201ENSMUST00000157260 71 ntBASIC2.52□□□□□ -2.01
Sdc4O35988 Gm24212-201ENSMUST00000158258 132 ntBASIC2.52□□□□□ -2.01
Sdc4O35988 Gm22516-201ENSMUST00000158266 124 ntBASIC2.52□□□□□ -2.01
Sdc4O35988 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC2.52□□□□□ -2.01
Sdc4O35988 Mir6386-201ENSMUST00000183558 104 ntBASIC2.52□□□□□ -2.01
Sdc4O35988 Mir6363-201ENSMUST00000184880 114 ntBASIC2.52□□□□□ -2.01
Sdc4O35988 Gm27369-201ENSMUST00000185182 71 ntBASIC2.52□□□□□ -2.01
Sdc4O35988 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Sdc4O35988 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC2.52□□□□□ -2.01
Sdc4O35988 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms