Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm11692-201ENSMUST00000122121 902 ntBASIC3.68□□□□□ -1.82
Clk3O35492 Gm25104-201ENSMUST00000122476 163 ntBASIC3.68□□□□□ -1.82
Clk3O35492 Gm25965-201ENSMUST00000157170 93 ntBASIC3.68□□□□□ -1.82
Clk3O35492 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC3.68□□□□□ -1.82
Clk3O35492 Gm28343-201ENSMUST00000185386 112 ntBASIC3.68□□□□□ -1.82
Clk3O35492 Gm30280-201ENSMUST00000192214 262 ntBASIC3.68□□□□□ -1.82
Clk3O35492 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Clk3O35492 Gm43224-201ENSMUST00000201567 898 ntBASIC3.68□□□□□ -1.82
Clk3O35492 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.68□□□□□ -1.82
Clk3O35492 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.68□□□□□ -1.82
Clk3O35492 Gm17890-201ENSMUST00000221419 757 ntBASIC3.68□□□□□ -1.82
Clk3O35492 Gm5955-201ENSMUST00000222712 219 ntBASIC3.68□□□□□ -1.82
Clk3O35492 CT030662.1-201ENSMUST00000227380 232 ntBASIC3.68□□□□□ -1.82
Clk3O35492 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC3.68□□□□□ -1.82
Clk3O35492 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Clk3O35492 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Clk3O35492 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.68□□□□□ -1.82
Clk3O35492 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Clk3O35492 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Clk3O35492 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Clk3O35492 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
Clk3O35492 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Clk3O35492 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Clk3O35492 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Clk3O35492 Mir551b-201ENSMUST00000102165 98 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Igkv13-87-201ENSMUST00000114214 286 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Gm12982-201ENSMUST00000117408 190 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Gm13155-201ENSMUST00000119277 646 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Gm6797-201ENSMUST00000119440 512 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Gm15037-201ENSMUST00000120358 259 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Gm14428-201ENSMUST00000120408 822 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Gm8244-201ENSMUST00000121254 264 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Gm8178-201ENSMUST00000121570 646 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Gm4916-201ENSMUST00000126139 642 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.67□□□□□ -1.82
Clk3O35492 Gm24503-201ENSMUST00000158454 135 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Gm7241-201ENSMUST00000159853 357 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Gm16101-201ENSMUST00000160695 430 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.67□□□□□ -1.82
Clk3O35492 Gm22716-201ENSMUST00000177596 107 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Gm28283-201ENSMUST00000185509 178 ntBASIC3.67□□□□□ -1.82
Clk3O35492 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.67□□□□□ -1.82
Clk3O35492 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC3.67□□□□□ -1.82
Clk3O35492 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Gm28654-201ENSMUST00000189801 379 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Gm28927-201ENSMUST00000191528 272 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Gm38329-201ENSMUST00000193473 427 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Gm44354-201ENSMUST00000196017 143 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC3.67□□□□□ -1.82
Clk3O35492 Gm34091-201ENSMUST00000200875 604 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Gm44923-201ENSMUST00000206673 85 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Gm44919-201ENSMUST00000208587 1073 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Clk3O35492 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Clk3O35492 AC157654.1-201ENSMUST00000224130 820 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Clk3O35492 Gm5548-201ENSMUST00000055878 397 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Clk3O35492 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Clk3O35492 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Clk3O35492 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Clk3O35492 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Clk3O35492 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.67□□□□□ -1.82
Clk3O35492 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Clk3O35492 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Clk3O35492 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Clk3O35492 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Clk3O35492 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Clk3O35492 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Gm23577-201ENSMUST00000103950 110 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Gm24831-201ENSMUST00000116778 126 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Gm22676-201ENSMUST00000116972 129 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Gm14753-201ENSMUST00000118503 246 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Gm9308-201ENSMUST00000119073 448 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Gm11430-201ENSMUST00000121317 217 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Clk3O35492 Gm22107-201ENSMUST00000122548 100 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.66□□□□□ -1.82
Clk3O35492 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.66□□□□□ -1.82
Clk3O35492 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Clk3O35492 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.66□□□□□ -1.82
Clk3O35492 Gm22166-201ENSMUST00000178419 121 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Gm23288-201ENSMUST00000179213 121 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Gm27834-201ENSMUST00000183427 125 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Gm27161-201ENSMUST00000183960 562 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Mir7028-201ENSMUST00000185016 64 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms