Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm24664-201ENSMUST00000158939 100 ntBASIC3.15□□□□□ -1.9
Shank1D3YZU1 Gm29389-201ENSMUST00000191562 352 ntBASIC3.15□□□□□ -1.9
Shank1D3YZU1 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC3.15□□□□□ -1.9
Shank1D3YZU1 Gm37817-201ENSMUST00000195276 434 ntBASIC3.15□□□□□ -1.9
Shank1D3YZU1 Gm9236-201ENSMUST00000196892 587 ntBASIC3.15□□□□□ -1.9
Shank1D3YZU1 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC3.15□□□□□ -1.9
Shank1D3YZU1 Gm43494-201ENSMUST00000197672 388 ntBASIC3.15□□□□□ -1.9
Shank1D3YZU1 Gm42164-201ENSMUST00000198881 379 ntBASIC3.15□□□□□ -1.9
Shank1D3YZU1 Gm18026-201ENSMUST00000222789 727 ntBASIC3.15□□□□□ -1.9
Shank1D3YZU1 AC166358.4-201ENSMUST00000223030 105 ntBASIC3.15□□□□□ -1.9
Shank1D3YZU1 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.15□□□□□ -1.9
Shank1D3YZU1 AC154270.1-201ENSMUST00000227226 426 ntBASIC3.15□□□□□ -1.9
Shank1D3YZU1 CT030662.1-201ENSMUST00000227380 232 ntBASIC3.15□□□□□ -1.9
Shank1D3YZU1 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Shank1D3YZU1 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Shank1D3YZU1 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Shank1D3YZU1 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Shank1D3YZU1 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.15□□□□□ -1.9
Shank1D3YZU1 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Shank1D3YZU1 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
Shank1D3YZU1 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Shank1D3YZU1 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Shank1D3YZU1 Gm11357-201ENSMUST00000119758 954 ntBASIC3.15□□□□□ -1.91
Shank1D3YZU1 Gm16017-201ENSMUST00000119834 208 ntBASIC3.15□□□□□ -1.91
Shank1D3YZU1 Gm23352-201ENSMUST00000158428 64 ntBASIC3.15□□□□□ -1.91
Shank1D3YZU1 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.15□□□□□ -1.91
Shank1D3YZU1 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Shank1D3YZU1 Gm28414-201ENSMUST00000190111 294 ntBASIC3.15□□□□□ -1.91
Shank1D3YZU1 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.15□□□□□ -1.91
Shank1D3YZU1 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.15□□□□□ -1.91
Shank1D3YZU1 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Shank1D3YZU1 Gm5917-201ENSMUST00000217638 721 ntBASIC3.15□□□□□ -1.91
Shank1D3YZU1 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC3.15□□□□□ -1.91
Shank1D3YZU1 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC3.15□□□□□ -1.91
Shank1D3YZU1 Gm18113-201ENSMUST00000220630 303 ntBASIC3.15□□□□□ -1.91
Shank1D3YZU1 CT025157.1-201ENSMUST00000226241 292 ntBASIC3.15□□□□□ -1.91
Shank1D3YZU1 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Shank1D3YZU1 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Shank1D3YZU1 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Shank1D3YZU1 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Shank1D3YZU1 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.15□□□□□ -1.91
Shank1D3YZU1 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.15□□□□□ -1.91
Shank1D3YZU1 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.15□□□□□ -1.91
Shank1D3YZU1 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Shank1D3YZU1 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm12495-201ENSMUST00000119750 447 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm16021-201ENSMUST00000121176 219 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm12706-201ENSMUST00000121588 698 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm24059-201ENSMUST00000157493 312 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC3.14□□□□□ -1.91
Shank1D3YZU1 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm29552-201ENSMUST00000190548 660 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Trbv22-201ENSMUST00000191697 291 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm37698-201ENSMUST00000192605 463 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm43841-201ENSMUST00000199491 586 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm43224-201ENSMUST00000201567 898 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm39147-201ENSMUST00000211376 465 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Shank1D3YZU1 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.14□□□□□ -1.91
Shank1D3YZU1 AC126253.2-201ENSMUST00000226518 205 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 AC115735.3-201ENSMUST00000227757 513 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Shank1D3YZU1 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Shank1D3YZU1 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Shank1D3YZU1 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Shank1D3YZU1 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Shank1D3YZU1 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Shank1D3YZU1 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Shank1D3YZU1 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Shank1D3YZU1 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Shank1D3YZU1 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm22750-201ENSMUST00000102076 103 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Shank1D3YZU1 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm14811-201ENSMUST00000117070 117 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm15180-201ENSMUST00000117745 492 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm14835-201ENSMUST00000119039 315 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm24898-201ENSMUST00000158133 106 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm17421-201ENSMUST00000167845 674 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm25874-201ENSMUST00000178030 79 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm29556-201ENSMUST00000187591 696 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.14□□□□□ -1.91
Shank1D3YZU1 Igkv2-105-201ENSMUST00000196931 377 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm43431-201ENSMUST00000198577 340 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm8319-201ENSMUST00000205708 641 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm7624-201ENSMUST00000209702 435 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Gm7948-201ENSMUST00000212607 844 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 AC101677.1-201ENSMUST00000218590 158 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.14□□□□□ -1.91
Shank1D3YZU1 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms