Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm23005-201ENSMUST00000158950 136 ntBASIC1.91□□□□□ -2.1
Col6a4A2AX52 Gm22698-201ENSMUST00000175375 108 ntBASIC1.91□□□□□ -2.1
Col6a4A2AX52 Gm6501-201ENSMUST00000187178 916 ntBASIC1.91□□□□□ -2.1
Col6a4A2AX52 Gm6615-201ENSMUST00000199426 631 ntBASIC1.91□□□□□ -2.1
Col6a4A2AX52 Gm44083-201ENSMUST00000203114 337 ntBASIC1.91□□□□□ -2.1
Col6a4A2AX52 Gm2691-201ENSMUST00000203205 901 ntBASIC1.91□□□□□ -2.1
Col6a4A2AX52 AC124356.2-201ENSMUST00000221874 336 ntBASIC1.91□□□□□ -2.1
Col6a4A2AX52 AC132446.1-201ENSMUST00000222655 226 ntBASIC1.91□□□□□ -2.1
Col6a4A2AX52 AC109172.2-201ENSMUST00000228792 381 ntBASIC1.91□□□□□ -2.1
Col6a4A2AX52 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Col6a4A2AX52 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Col6a4A2AX52 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Col6a4A2AX52 Gm14429-201ENSMUST00000121881 2024 ntBASIC1.91□□□□□ -2.1
Col6a4A2AX52 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
Col6a4A2AX52 Gm8935-201ENSMUST00000066794 2798 ntBASIC1.9□□□□□ -2.1
Col6a4A2AX52 Gm25806-201ENSMUST00000122782 122 ntBASIC1.9□□□□□ -2.1
Col6a4A2AX52 Gm25807-201ENSMUST00000122783 305 ntBASIC1.9□□□□□ -2.1
Col6a4A2AX52 Gm23385-201ENSMUST00000158592 295 ntBASIC1.9□□□□□ -2.1
Col6a4A2AX52 Gm26024-201ENSMUST00000158657 322 ntBASIC1.9□□□□□ -2.1
Col6a4A2AX52 Gm27443-201ENSMUST00000184660 98 ntBASIC1.9□□□□□ -2.1
Col6a4A2AX52 Gm37162-201ENSMUST00000191708 551 ntBASIC1.9□□□□□ -2.1
Col6a4A2AX52 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC1.9□□□□□ -2.1
Col6a4A2AX52 Gm7214-201ENSMUST00000222428 272 ntBASIC1.9□□□□□ -2.1
Col6a4A2AX52 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
Col6a4A2AX52 Snora33-201ENSMUST00000093556 129 ntBASIC1.9□□□□□ -2.1
Col6a4A2AX52 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
Col6a4A2AX52 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
Col6a4A2AX52 Gm37895-201ENSMUST00000192448 4550 ntBASIC1.9□□□□□ -2.11
Col6a4A2AX52 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Col6a4A2AX52 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Col6a4A2AX52 Gm45178-201ENSMUST00000207744 4110 ntBASIC1.9□□□□□ -2.11
Col6a4A2AX52 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Col6a4A2AX52 Gm7974-201ENSMUST00000117154 408 ntBASIC1.9□□□□□ -2.11
Col6a4A2AX52 Gm6565-201ENSMUST00000121217 438 ntBASIC1.9□□□□□ -2.11
Col6a4A2AX52 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.9□□□□□ -2.11
Col6a4A2AX52 Gm25460-201ENSMUST00000157954 127 ntBASIC1.9□□□□□ -2.11
Col6a4A2AX52 Gm44817-201ENSMUST00000205416 453 ntBASIC1.9□□□□□ -2.11
Col6a4A2AX52 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC1.9□□□□□ -2.11
Col6a4A2AX52 n-R5s220-201ENSMUST00000082926 120 ntBASIC1.9□□□□□ -2.11
Col6a4A2AX52 Gm10212-201ENSMUST00000087884 324 ntBASIC1.9□□□□□ -2.11
Col6a4A2AX52 CT025538.3-201ENSMUST00000225279 3848 ntBASIC1.9□□□□□ -2.11
Col6a4A2AX52 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Col6a4A2AX52 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Col6a4A2AX52 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Col6a4A2AX52 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Col6a4A2AX52 Gm26077-201ENSMUST00000104064 123 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 Gm6486-201ENSMUST00000166202 434 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
Col6a4A2AX52 Mir3106-201ENSMUST00000175401 82 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 Gm15143-201ENSMUST00000178180 714 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 Gm19257-201ENSMUST00000186121 183 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 Gm43841-201ENSMUST00000199491 586 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 Gm19252-201ENSMUST00000204705 305 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 AC154224.1-201ENSMUST00000224367 403 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC1.89□□□□□ -2.11
Col6a4A2AX52 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Col6a4A2AX52 Gm25099-201ENSMUST00000093716 116 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
Col6a4A2AX52 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Col6a4A2AX52 Mir542-201ENSMUST00000102186 85 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 Gm14793-201ENSMUST00000118739 311 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 Gm14877-201ENSMUST00000119803 478 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 Gm12042-201ENSMUST00000120479 301 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 Gm14804-201ENSMUST00000122322 508 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Col6a4A2AX52 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.89□□□□□ -2.11
Col6a4A2AX52 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC1.89□□□□□ -2.11
Col6a4A2AX52 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Col6a4A2AX52 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Col6a4A2AX52 Gm11253-201ENSMUST00000118486 201 ntBASIC1.88□□□□□ -2.11
Col6a4A2AX52 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC1.88□□□□□ -2.11
Col6a4A2AX52 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC1.88□□□□□ -2.11
Col6a4A2AX52 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC1.88□□□□□ -2.11
Col6a4A2AX52 Gm22159-201ENSMUST00000158412 130 ntBASIC1.88□□□□□ -2.11
Col6a4A2AX52 Trbv27-201ENSMUST00000193711 277 ntBASIC1.88□□□□□ -2.11
Col6a4A2AX52 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC1.88□□□□□ -2.11
Col6a4A2AX52 Igkv2-105-201ENSMUST00000196931 377 ntBASIC1.88□□□□□ -2.11
Col6a4A2AX52 Gm44403-201ENSMUST00000198554 129 ntBASIC1.88□□□□□ -2.11
Col6a4A2AX52 CT030030.1-201ENSMUST00000218809 152 ntBASIC1.88□□□□□ -2.11
Col6a4A2AX52 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC1.88□□□□□ -2.11
Col6a4A2AX52 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Col6a4A2AX52 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Col6a4A2AX52 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
Col6a4A2AX52 Gm15183-201ENSMUST00000118933 348 ntBASIC1.88□□□□□ -2.11
Col6a4A2AX52 Gm12935-201ENSMUST00000119352 246 ntBASIC1.88□□□□□ -2.11
Col6a4A2AX52 Gm14559-201ENSMUST00000121745 496 ntBASIC1.88□□□□□ -2.11
Col6a4A2AX52 Gm24561-201ENSMUST00000175182 95 ntBASIC1.88□□□□□ -2.11
Col6a4A2AX52 Gm22108-201ENSMUST00000177961 106 ntBASIC1.88□□□□□ -2.11
Col6a4A2AX52 Gm24798-201ENSMUST00000179334 106 ntBASIC1.88□□□□□ -2.11
Col6a4A2AX52 Gm28623-201ENSMUST00000187219 192 ntBASIC1.88□□□□□ -2.11
Col6a4A2AX52 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Col6a4A2AX52 Gm37720-201ENSMUST00000195497 1241 ntBASIC1.88□□□□□ -2.11
Col6a4A2AX52 Gm44490-201ENSMUST00000198566 127 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms