Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Mir193b-201ENSMUST00000103784 79 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm26423-201ENSMUST00000104277 128 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm13424-201ENSMUST00000122301 354 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm14804-201ENSMUST00000122322 508 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm25105-201ENSMUST00000122477 130 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Mup-ps4-201ENSMUST00000151005 539 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm23602-201ENSMUST00000157258 132 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm22840-201ENSMUST00000158444 136 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm26219-201ENSMUST00000175216 71 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm22910-201ENSMUST00000178568 132 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Mir6943-201ENSMUST00000185186 66 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm27964-201ENSMUST00000185195 62 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm8498-201ENSMUST00000188227 974 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm6651-201ENSMUST00000189471 271 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm29553-201ENSMUST00000189692 279 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm44476-201ENSMUST00000196225 91 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm44399-201ENSMUST00000205043 226 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm44611-201ENSMUST00000207507 355 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm45038-201ENSMUST00000207537 3838 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gm45072-201ENSMUST00000208673 929 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 AC168059.2-201ENSMUST00000224473 333 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Snord35b-201ENSMUST00000082833 87 ntBASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
Trav11A0A0B4J1J9 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm14469-201ENSMUST00000118363 202 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm7429-201ENSMUST00000118664 348 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm12335-201ENSMUST00000119738 327 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm22339-201ENSMUST00000157718 62 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm27592-201ENSMUST00000157729 126 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm22174-201ENSMUST00000175050 125 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm22692-201ENSMUST00000175055 125 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm27634-201ENSMUST00000175060 126 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm24080-201ENSMUST00000175178 232 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm22460-201ENSMUST00000175269 124 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm25535-201ENSMUST00000175364 125 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm24365-201ENSMUST00000175384 125 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm44310-201ENSMUST00000175424 126 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm22639-201ENSMUST00000175591 125 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm24757-201ENSMUST00000176987 371 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm24979-201ENSMUST00000178626 126 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Mir6411-201ENSMUST00000183556 108 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm27527-201ENSMUST00000183903 99 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm27743-201ENSMUST00000185136 126 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm9696-202ENSMUST00000191541 830 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm43521-201ENSMUST00000197838 255 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm18982-201ENSMUST00000198118 529 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm43107-201ENSMUST00000198729 255 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm44355-201ENSMUST00000200417 104 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm44208-201ENSMUST00000205199 421 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm44600-201ENSMUST00000208540 111 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Olfr936-202ENSMUST00000216912 937 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm8231-201ENSMUST00000221617 783 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm18363-201ENSMUST00000221671 730 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 AC154598.1-201ENSMUST00000227079 347 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Olfr512-201ENSMUST00000074730 1056 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm4987-201ENSMUST00000078326 408 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Mir21a-201ENSMUST00000083521 92 ntBASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.19□□□□□ -2.06
Trav11A0A0B4J1J9 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms