Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 AC167669.3-201ENSMUST00000224720 393 ntBASIC2.37□□□□□ -2.03
Trbv1A0A0B4J1G7 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.37□□□□□ -2.03
Trbv1A0A0B4J1G7 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trbv1A0A0B4J1G7 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trbv1A0A0B4J1G7 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trbv1A0A0B4J1G7 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trbv1A0A0B4J1G7 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trbv1A0A0B4J1G7 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm25403-201ENSMUST00000082971 143 ntBASIC2.37□□□□□ -2.03
Trbv1A0A0B4J1G7 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm37999-201ENSMUST00000195178 1809 ntBASIC2.37□□□□□ -2.03
Trbv1A0A0B4J1G7 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trbv1A0A0B4J1G7 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.37□□□□□ -2.03
Trbv1A0A0B4J1G7 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm22488-201ENSMUST00000116811 127 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm13731-201ENSMUST00000117332 196 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm13087-201ENSMUST00000118298 256 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm22026-201ENSMUST00000122735 281 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm25295-201ENSMUST00000122794 306 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm24905-201ENSMUST00000158129 104 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm16236-201ENSMUST00000159588 379 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm7346-201ENSMUST00000169661 476 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm22858-201ENSMUST00000174972 76 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Mir3112-201ENSMUST00000175431 82 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm24754-201ENSMUST00000177997 107 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Mir6411-201ENSMUST00000183556 108 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm29299-201ENSMUST00000185609 923 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Npn2-202ENSMUST00000189275 235 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm29573-201ENSMUST00000190291 919 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm43096-201ENSMUST00000196173 421 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Amd-ps5-201ENSMUST00000198406 989 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm19563-201ENSMUST00000222031 270 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms