Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Nubp1Q9R060 Gm25415-201ENSMUST00000104220 132 ntBASIC5.22□□□□□ -1.57
Nubp1Q9R060 Gm22592-201ENSMUST00000104242 131 ntBASIC5.22□□□□□ -1.57
Nubp1Q9R060 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.22□□□□□ -1.57
Nubp1Q9R060 Gm23782-201ENSMUST00000157939 120 ntBASIC5.22□□□□□ -1.57
Nubp1Q9R060 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.22□□□□□ -1.57
Nubp1Q9R060 Gm37511-201ENSMUST00000192901 294 ntBASIC5.22□□□□□ -1.57
Nubp1Q9R060 Gm43309-201ENSMUST00000200837 458 ntBASIC5.22□□□□□ -1.57
Nubp1Q9R060 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.22□□□□□ -1.57
Nubp1Q9R060 Gm6796-201ENSMUST00000211919 243 ntBASIC5.22□□□□□ -1.57
Nubp1Q9R060 Gm9512-201ENSMUST00000223112 497 ntBASIC5.22□□□□□ -1.57
Nubp1Q9R060 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.22□□□□□ -1.57
Nubp1Q9R060 AC164437.2-201ENSMUST00000228915 797 ntBASIC5.22□□□□□ -1.57
Nubp1Q9R060 n-R5s56-201ENSMUST00000082521 105 ntBASIC5.22□□□□□ -1.57
Nubp1Q9R060 Gm22300-201ENSMUST00000082661 126 ntBASIC5.22□□□□□ -1.57
Nubp1Q9R060 Gm25896-201ENSMUST00000083713 136 ntBASIC5.22□□□□□ -1.57
Nubp1Q9R060 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Nubp1Q9R060 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nubp1Q9R060 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Nubp1Q9R060 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nubp1Q9R060 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nubp1Q9R060 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Nubp1Q9R060 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Nubp1Q9R060 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.21□□□□□ -1.57
Nubp1Q9R060 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Nubp1Q9R060 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Gm13343-201ENSMUST00000116474 105 ntBASIC5.21□□□□□ -1.58
Nubp1Q9R060 Gm13504-201ENSMUST00000117490 316 ntBASIC5.21□□□□□ -1.58
Nubp1Q9R060 Gm12793-201ENSMUST00000119268 292 ntBASIC5.21□□□□□ -1.58
Nubp1Q9R060 Gm12094-201ENSMUST00000121781 472 ntBASIC5.21□□□□□ -1.58
Nubp1Q9R060 Gm11204-201ENSMUST00000122438 147 ntBASIC5.21□□□□□ -1.58
Nubp1Q9R060 Gm26023-201ENSMUST00000122722 313 ntBASIC5.21□□□□□ -1.58
Nubp1Q9R060 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Gm25115-201ENSMUST00000157187 140 ntBASIC5.21□□□□□ -1.58
Nubp1Q9R060 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.21□□□□□ -1.58
Nubp1Q9R060 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Igkv2-113-201ENSMUST00000196138 362 ntBASIC5.21□□□□□ -1.58
Nubp1Q9R060 Gm44219-201ENSMUST00000203005 273 ntBASIC5.21□□□□□ -1.58
Nubp1Q9R060 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nubp1Q9R060 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.21□□□□□ -1.58
Nubp1Q9R060 Gm22806-201ENSMUST00000082738 136 ntBASIC5.21□□□□□ -1.58
Nubp1Q9R060 Gm23238-201ENSMUST00000083007 164 ntBASIC5.21□□□□□ -1.58
Nubp1Q9R060 Gm22353-201ENSMUST00000083918 136 ntBASIC5.21□□□□□ -1.58
Nubp1Q9R060 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.21□□□□□ -1.58
Nubp1Q9R060 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
Nubp1Q9R060 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC5.21□□□□□ -1.58
Nubp1Q9R060 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC5.21□□□□□ -1.58
Nubp1Q9R060 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Nubp1Q9R060 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Nubp1Q9R060 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Nubp1Q9R060 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Nubp1Q9R060 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Nubp1Q9R060 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Nubp1Q9R060 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nubp1Q9R060 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.2□□□□□ -1.58
Nubp1Q9R060 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.2□□□□□ -1.58
Nubp1Q9R060 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nubp1Q9R060 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Nubp1Q9R060 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nubp1Q9R060 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Nubp1Q9R060 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC5.2□□□□□ -1.58
Nubp1Q9R060 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Nubp1Q9R060 Gm24116-201ENSMUST00000103975 107 ntBASIC5.2□□□□□ -1.58
Nubp1Q9R060 Gm11561-201ENSMUST00000117429 417 ntBASIC5.2□□□□□ -1.58
Nubp1Q9R060 Gm11737-201ENSMUST00000118713 468 ntBASIC5.2□□□□□ -1.58
Nubp1Q9R060 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.2□□□□□ -1.58
Nubp1Q9R060 Gm28627-201ENSMUST00000186141 453 ntBASIC5.2□□□□□ -1.58
Nubp1Q9R060 Gm38270-201ENSMUST00000192721 407 ntBASIC5.2□□□□□ -1.58
Nubp1Q9R060 Gm37617-201ENSMUST00000194309 159 ntBASIC5.2□□□□□ -1.58
Nubp1Q9R060 Mir465d-201ENSMUST00000196314 58 ntBASIC5.2□□□□□ -1.58
Nubp1Q9R060 Gm29781-201ENSMUST00000203862 478 ntBASIC5.2□□□□□ -1.58
Nubp1Q9R060 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.2□□□□□ -1.58
Nubp1Q9R060 Gm10709-201ENSMUST00000213318 480 ntBASIC5.2□□□□□ -1.58
Nubp1Q9R060 Gm6049-201ENSMUST00000222369 458 ntBASIC5.2□□□□□ -1.58
Nubp1Q9R060 Gm7093-201ENSMUST00000223004 581 ntBASIC5.2□□□□□ -1.58
Nubp1Q9R060 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.2□□□□□ -1.58
Nubp1Q9R060 AC166830.2-201ENSMUST00000225821 196 ntBASIC5.2□□□□□ -1.58
Nubp1Q9R060 Mir302d-201ENSMUST00000083513 66 ntBASIC5.2□□□□□ -1.58
Nubp1Q9R060 Gm25651-201ENSMUST00000083782 119 ntBASIC5.2□□□□□ -1.58
Nubp1Q9R060 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Nubp1Q9R060 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5.2□□□□□ -1.58
Nubp1Q9R060 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 133.1 ms