Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.89□□□□□ -1.95
Scn11aQ9R053 Gm45072-201ENSMUST00000208673 929 ntBASIC2.89□□□□□ -1.95
Scn11aQ9R053 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.89□□□□□ -1.95
Scn11aQ9R053 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Scn11aQ9R053 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.89□□□□□ -1.95
Scn11aQ9R053 Gm36962-201ENSMUST00000192114 1761 ntBASIC2.88□□□□□ -1.95
Scn11aQ9R053 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
Scn11aQ9R053 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Scn11aQ9R053 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.88□□□□□ -1.95
Scn11aQ9R053 Gm14823-201ENSMUST00000117698 238 ntBASIC2.88□□□□□ -1.95
Scn11aQ9R053 Gm15025-201ENSMUST00000118434 418 ntBASIC2.88□□□□□ -1.95
Scn11aQ9R053 Gm12213-201ENSMUST00000119924 353 ntBASIC2.88□□□□□ -1.95
Scn11aQ9R053 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC2.88□□□□□ -1.95
Scn11aQ9R053 Gm22084-201ENSMUST00000157585 105 ntBASIC2.88□□□□□ -1.95
Scn11aQ9R053 Gm23152-201ENSMUST00000175322 116 ntBASIC2.88□□□□□ -1.95
Scn11aQ9R053 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.88□□□□□ -1.95
Scn11aQ9R053 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Scn11aQ9R053 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Scn11aQ9R053 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Scn11aQ9R053 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Scn11aQ9R053 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Scn11aQ9R053 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC2.88□□□□□ -1.95
Scn11aQ9R053 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC2.87□□□□□ -1.95
Scn11aQ9R053 Gm21742-201ENSMUST00000189352 548 ntBASIC2.87□□□□□ -1.95
Scn11aQ9R053 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Scn11aQ9R053 Trbv27-201ENSMUST00000193711 277 ntBASIC2.87□□□□□ -1.95
Scn11aQ9R053 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.87□□□□□ -1.95
Scn11aQ9R053 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.87□□□□□ -1.95
Scn11aQ9R053 CT485608.1-201ENSMUST00000228759 389 ntBASIC2.87□□□□□ -1.95
Scn11aQ9R053 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Scn11aQ9R053 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Scn11aQ9R053 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
Scn11aQ9R053 Gm12941-201ENSMUST00000117934 220 ntBASIC2.87□□□□□ -1.95
Scn11aQ9R053 Gm43975-201ENSMUST00000203023 481 ntBASIC2.87□□□□□ -1.95
Scn11aQ9R053 Gm45395-201ENSMUST00000209891 559 ntBASIC2.87□□□□□ -1.95
Scn11aQ9R053 AC153899.1-201ENSMUST00000214092 1117 ntBASIC2.87□□□□□ -1.95
Scn11aQ9R053 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Scn11aQ9R053 Gm15244-201ENSMUST00000121122 130 ntBASIC2.86□□□□□ -1.95
Scn11aQ9R053 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC2.86□□□□□ -1.95
Scn11aQ9R053 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.86□□□□□ -1.95
Scn11aQ9R053 Mir3106-201ENSMUST00000175401 82 ntBASIC2.86□□□□□ -1.95
Scn11aQ9R053 Mrgprb13-201ENSMUST00000188191 985 ntBASIC2.86□□□□□ -1.95
Scn11aQ9R053 Gm43901-201ENSMUST00000203247 453 ntBASIC2.86□□□□□ -1.95
Scn11aQ9R053 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Scn11aQ9R053 Gm4528-201ENSMUST00000207905 551 ntBASIC2.86□□□□□ -1.95
Scn11aQ9R053 Gm45654-201ENSMUST00000210980 123 ntBASIC2.86□□□□□ -1.95
Scn11aQ9R053 AC159472.1-201ENSMUST00000218178 463 ntBASIC2.86□□□□□ -1.95
Scn11aQ9R053 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.86□□□□□ -1.95
Scn11aQ9R053 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.86□□□□□ -1.95
Scn11aQ9R053 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Scn11aQ9R053 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Scn11aQ9R053 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.86□□□□□ -1.95
Scn11aQ9R053 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.85□□□□□ -1.95
Scn11aQ9R053 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Scn11aQ9R053 Gm14589-201ENSMUST00000121640 727 ntBASIC2.85□□□□□ -1.95
Scn11aQ9R053 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.85□□□□□ -1.95
Scn11aQ9R053 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.85□□□□□ -1.95
Scn11aQ9R053 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC2.85□□□□□ -1.95
Scn11aQ9R053 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC2.85□□□□□ -1.95
Scn11aQ9R053 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.85□□□□□ -1.95
Scn11aQ9R053 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Scn11aQ9R053 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Scn11aQ9R053 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Scn11aQ9R053 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.85□□□□□ -1.95
Scn11aQ9R053 Gm14804-201ENSMUST00000122322 508 ntBASIC2.84□□□□□ -1.95
Scn11aQ9R053 Gm13868-201ENSMUST00000122411 294 ntBASIC2.84□□□□□ -1.95
Scn11aQ9R053 Gm23585-201ENSMUST00000157656 102 ntBASIC2.84□□□□□ -1.95
Scn11aQ9R053 Gm26171-201ENSMUST00000158422 131 ntBASIC2.84□□□□□ -1.95
Scn11aQ9R053 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Scn11aQ9R053 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC2.84□□□□□ -1.95
Scn11aQ9R053 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC2.84□□□□□ -1.95
Scn11aQ9R053 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC2.84□□□□□ -1.95
Scn11aQ9R053 Gm43922-201ENSMUST00000205071 328 ntBASIC2.84□□□□□ -1.95
Scn11aQ9R053 AC147615.1-201ENSMUST00000218914 441 ntBASIC2.84□□□□□ -1.95
Scn11aQ9R053 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.84□□□□□ -1.95
Scn11aQ9R053 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.84□□□□□ -1.95
Scn11aQ9R053 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Scn11aQ9R053 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC2.84□□□□□ -1.95
Scn11aQ9R053 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
Scn11aQ9R053 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.96
Scn11aQ9R053 Gm15854-201ENSMUST00000118879 808 ntBASIC2.84□□□□□ -1.96
Scn11aQ9R053 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.84□□□□□ -1.96
Scn11aQ9R053 Gm22556-201ENSMUST00000157803 100 ntBASIC2.84□□□□□ -1.96
Scn11aQ9R053 Gm22361-201ENSMUST00000158435 176 ntBASIC2.84□□□□□ -1.96
Scn11aQ9R053 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.84□□□□□ -1.96
Scn11aQ9R053 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
Scn11aQ9R053 Gm37732-201ENSMUST00000194377 316 ntBASIC2.84□□□□□ -1.96
Scn11aQ9R053 Gm44609-201ENSMUST00000207157 460 ntBASIC2.84□□□□□ -1.96
Scn11aQ9R053 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.84□□□□□ -1.96
Scn11aQ9R053 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.84□□□□□ -1.96
Scn11aQ9R053 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Scn11aQ9R053 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Scn11aQ9R053 Gm25488-201ENSMUST00000158728 118 ntBASIC2.83□□□□□ -1.96
Scn11aQ9R053 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Scn11aQ9R053 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC2.83□□□□□ -1.96
Scn11aQ9R053 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.83□□□□□ -1.96
Scn11aQ9R053 AC116726.2-201ENSMUST00000217629 986 ntBASIC2.83□□□□□ -1.96
Scn11aQ9R053 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC2.83□□□□□ -1.96
Scn11aQ9R053 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Scn11aQ9R053 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms