Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Gm7974-201ENSMUST00000117154 408 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Gm14020-201ENSMUST00000118165 662 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Gm13085-201ENSMUST00000118356 171 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Gm13167-201ENSMUST00000118554 578 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Gm5762-201ENSMUST00000119204 258 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Gm4852-201ENSMUST00000121202 729 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Gm25666-201ENSMUST00000157702 107 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Gm20698-201ENSMUST00000175657 233 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Gm18397-201ENSMUST00000176704 587 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Gm22395-201ENSMUST00000177427 96 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Mir6971-201ENSMUST00000183497 63 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Mir6386-201ENSMUST00000183558 104 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Gm27189-201ENSMUST00000184119 190 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Gm27875-201ENSMUST00000184425 123 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Gm6801-201ENSMUST00000190697 339 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Gm9931-201ENSMUST00000193584 1185 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Ighv10-4-201ENSMUST00000193702 299 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Gm43967-201ENSMUST00000203787 301 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Gm45614-201ENSMUST00000209994 721 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Gm45327-201ENSMUST00000211612 565 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 AC153971.2-201ENSMUST00000214553 777 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 AC166574.3-201ENSMUST00000226725 367 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 AC154598.1-201ENSMUST00000227079 347 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Gm38699-201ENSMUST00000221301 1740 ntBASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm14753-201ENSMUST00000118503 246 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm11913-201ENSMUST00000119094 336 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm12327-201ENSMUST00000121729 1168 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.86□□□□□ -1.95
Trem1Q9JKE2 n-R5s68-201ENSMUST00000122639 82 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm23592-201ENSMUST00000157859 117 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm23473-201ENSMUST00000158883 116 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm16111-201ENSMUST00000162128 285 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm20701-201ENSMUST00000176082 347 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm24757-201ENSMUST00000176987 371 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm27582-201ENSMUST00000184084 126 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm27964-201ENSMUST00000185195 62 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm7329-201ENSMUST00000185915 210 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm28534-201ENSMUST00000187744 676 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm28802-201ENSMUST00000188624 944 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm6680-201ENSMUST00000192789 950 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm37732-201ENSMUST00000194377 316 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm44475-201ENSMUST00000204041 424 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm45048-201ENSMUST00000207058 429 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm45395-201ENSMUST00000209891 559 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm7786-201ENSMUST00000210494 436 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm39147-201ENSMUST00000211376 465 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm35405-201ENSMUST00000218754 400 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC2.86□□□□□ -1.95
Trem1Q9JKE2 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Trem1Q9JKE2 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Gm25313-201ENSMUST00000101817 116 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Gm22658-201ENSMUST00000104196 155 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Gm649-201ENSMUST00000117284 1054 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Gm8569-201ENSMUST00000117630 647 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Gm12722-201ENSMUST00000118507 493 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Gm14566-201ENSMUST00000118915 321 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Gm12998-201ENSMUST00000122445 789 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Gm25058-201ENSMUST00000157365 128 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Gm5967-201ENSMUST00000172723 494 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Gm24925-201ENSMUST00000178157 107 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Gm23287-201ENSMUST00000179427 116 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Gm23143-201ENSMUST00000180137 116 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Gm26960-201ENSMUST00000182263 412 ntBASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC2.85□□□□□ -1.95
Trem1Q9JKE2 Gm8676-201ENSMUST00000184206 637 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms