Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Gm44727-201ENSMUST00000204225 451 ntBASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Gm44903-201ENSMUST00000206840 130 ntBASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Gm6012-201ENSMUST00000210821 730 ntBASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Gm18346-201ENSMUST00000216782 325 ntBASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Gm5265-201ENSMUST00000076828 342 ntBASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Gm6030-201ENSMUST00000078768 402 ntBASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Gm9597-202ENSMUST00000227632 1387 ntBASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.16□□□□□ -2.06
Trem3Q9JKE1 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.16□□□□□ -2.06
Trem3Q9JKE1 Gm23911-201ENSMUST00000104596 134 ntBASIC2.16□□□□□ -2.06
Trem3Q9JKE1 Gm22486-201ENSMUST00000116815 137 ntBASIC2.16□□□□□ -2.06
Trem3Q9JKE1 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
Trem3Q9JKE1 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC2.16□□□□□ -2.06
Trem3Q9JKE1 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC2.16□□□□□ -2.06
Trem3Q9JKE1 Gm24475-201ENSMUST00000157435 143 ntBASIC2.16□□□□□ -2.06
Trem3Q9JKE1 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC2.16□□□□□ -2.06
Trem3Q9JKE1 Mir6353-201ENSMUST00000183596 113 ntBASIC2.16□□□□□ -2.06
Trem3Q9JKE1 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trem3Q9JKE1 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
Trem3Q9JKE1 Gm28060-201ENSMUST00000191554 189 ntBASIC2.16□□□□□ -2.06
Trem3Q9JKE1 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC2.16□□□□□ -2.06
Trem3Q9JKE1 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.16□□□□□ -2.06
Trem3Q9JKE1 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC2.16□□□□□ -2.06
Trem3Q9JKE1 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.16□□□□□ -2.06
Trem3Q9JKE1 Gm45316-201ENSMUST00000210128 162 ntBASIC2.16□□□□□ -2.06
Trem3Q9JKE1 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.16□□□□□ -2.06
Trem3Q9JKE1 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.16□□□□□ -2.06
Trem3Q9JKE1 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC2.16□□□□□ -2.06
Trem3Q9JKE1 Gm43201-201ENSMUST00000195925 3416 ntBASIC2.16□□□□□ -2.06
Trem3Q9JKE1 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trem3Q9JKE1 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm23577-201ENSMUST00000103950 110 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm22658-201ENSMUST00000104196 155 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm15120-201ENSMUST00000120602 301 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trem3Q9JKE1 DQ267100-201ENSMUST00000122600 72 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm16373-201ENSMUST00000129517 303 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm23599-201ENSMUST00000157261 251 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm25185-201ENSMUST00000157754 96 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm25898-201ENSMUST00000158303 106 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm25839-201ENSMUST00000158921 103 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm17065-201ENSMUST00000165245 239 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm3104-201ENSMUST00000171004 473 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm3370-201ENSMUST00000171785 500 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm17166-201ENSMUST00000172006 431 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm21809-201ENSMUST00000178495 468 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm26991-201ENSMUST00000180950 620 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm8649-201ENSMUST00000181799 233 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Mir7242-201ENSMUST00000183710 79 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm4928-201ENSMUST00000219622 850 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm7422-201ENSMUST00000220115 640 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 AL590503.1-201ENSMUST00000222053 321 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 AC134254.5-201ENSMUST00000223436 400 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 AC124489.2-201ENSMUST00000223930 589 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trem3Q9JKE1 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm22507-201ENSMUST00000082773 160 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Trem3Q9JKE1 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Trem3Q9JKE1 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.14□□□□□ -2.07
Trem3Q9JKE1 Mir673-201ENSMUST00000102361 91 ntBASIC2.14□□□□□ -2.07
Trem3Q9JKE1 Gm25500-201ENSMUST00000104426 123 ntBASIC2.14□□□□□ -2.07
Trem3Q9JKE1 Gm26473-201ENSMUST00000116763 127 ntBASIC2.14□□□□□ -2.07
Trem3Q9JKE1 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC2.14□□□□□ -2.07
Trem3Q9JKE1 Gm14506-201ENSMUST00000121165 536 ntBASIC2.14□□□□□ -2.07
Trem3Q9JKE1 Gm13487-201ENSMUST00000122240 864 ntBASIC2.14□□□□□ -2.07
Trem3Q9JKE1 Gm8988-201ENSMUST00000155015 1240 ntBASIC2.14□□□□□ -2.07
Trem3Q9JKE1 Gm22322-201ENSMUST00000157151 111 ntBASIC2.14□□□□□ -2.07
Trem3Q9JKE1 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trem3Q9JKE1 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Trem3Q9JKE1 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.14□□□□□ -2.07
Trem3Q9JKE1 Gm44060-201ENSMUST00000204440 410 ntBASIC2.14□□□□□ -2.07
Trem3Q9JKE1 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Trem3Q9JKE1 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.14□□□□□ -2.07
Trem3Q9JKE1 AC158392.1-201ENSMUST00000223720 1069 ntBASIC2.14□□□□□ -2.07
Trem3Q9JKE1 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.14□□□□□ -2.07
Trem3Q9JKE1 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.14□□□□□ -2.07
Trem3Q9JKE1 AC183096.1-201ENSMUST00000226392 130 ntBASIC2.14□□□□□ -2.07
Trem3Q9JKE1 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms