Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm26652-202ENSMUST00000181672 475 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Gm28146-201ENSMUST00000185517 701 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Gm28574-201ENSMUST00000185757 699 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Gm28397-201ENSMUST00000187970 699 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Gm29366-201ENSMUST00000190481 699 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Gm31123-201ENSMUST00000192094 666 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Gm29950-201ENSMUST00000195273 237 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Igkv11-114-201ENSMUST00000200013 346 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Olfr936-202ENSMUST00000216912 937 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim54Q9ERP3 AC132384.9-201ENSMUST00000218085 277 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC4.08□□□□□ -1.76
Trim54Q9ERP3 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim54Q9ERP3 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trim54Q9ERP3 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trim54Q9ERP3 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm25272-201ENSMUST00000104293 128 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm24982-201ENSMUST00000104456 132 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm25563-201ENSMUST00000104603 74 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm14880-201ENSMUST00000117581 292 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm12697-201ENSMUST00000118008 667 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm15094-201ENSMUST00000118394 1131 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm15988-201ENSMUST00000118677 367 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm14541-201ENSMUST00000118985 157 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm14008-201ENSMUST00000120483 274 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm16274-201ENSMUST00000139251 592 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm25194-201ENSMUST00000177987 79 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm23619-201ENSMUST00000178411 94 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm25474-201ENSMUST00000179052 94 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm22047-201ENSMUST00000179176 94 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm26701-201ENSMUST00000181571 234 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm26960-201ENSMUST00000182263 412 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm27236-201ENSMUST00000184147 442 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm28500-201ENSMUST00000190286 151 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC4.07□□□□□ -1.76
Trim54Q9ERP3 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Igkv2-105-201ENSMUST00000196931 377 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm42850-201ENSMUST00000202094 201 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm45049-201ENSMUST00000207586 591 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC4.07□□□□□ -1.76
Trim54Q9ERP3 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC4.07□□□□□ -1.76
Trim54Q9ERP3 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 AC109172.2-201ENSMUST00000228792 381 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm22810-201ENSMUST00000082741 158 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm25205-201ENSMUST00000082841 103 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Gm24611-201ENSMUST00000083272 107 ntBASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Trim54Q9ERP3 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Gm11367-201ENSMUST00000117802 120 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Gm14793-201ENSMUST00000118739 311 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Gm11429-201ENSMUST00000119089 144 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Gm16005-201ENSMUST00000120515 269 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Gm13356-201ENSMUST00000121678 335 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Gm26348-201ENSMUST00000157528 240 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Gm25365-201ENSMUST00000158852 121 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Gm28010-201ENSMUST00000179485 126 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Gm27919-201ENSMUST00000185163 107 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Trbv22-201ENSMUST00000191697 291 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Gm36934-201ENSMUST00000192007 306 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Gm37550-201ENSMUST00000193230 463 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Gm5551-201ENSMUST00000199720 690 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Gm38395-201ENSMUST00000199904 830 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms