Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm14607-201ENSMUST00000119119 491 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Gm13487-201ENSMUST00000122240 864 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Gm22322-201ENSMUST00000157151 111 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Gm22330-201ENSMUST00000158068 115 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Gm8902-201ENSMUST00000174341 1096 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Gm18520-201ENSMUST00000174783 658 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Gm24220-201ENSMUST00000177753 79 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Gm25988-201ENSMUST00000177759 79 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Gm23471-201ENSMUST00000177886 79 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Gm26488-201ENSMUST00000178225 79 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Gm23449-201ENSMUST00000179208 79 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Gm25221-201ENSMUST00000180051 79 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Gm6113-201ENSMUST00000180319 639 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Lima1Q9ERG0 AC126043.1-201ENSMUST00000221304 1141 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 AC154184.2-201ENSMUST00000225335 349 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Mir325-201ENSMUST00000083491 98 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Gm16400-201ENSMUST00000116523 1029 ntBASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Gm14973-201ENSMUST00000117248 255 ntBASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Gm12492-201ENSMUST00000117665 564 ntBASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Gm11819-201ENSMUST00000122192 372 ntBASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Gm27155-201ENSMUST00000183716 898 ntBASIC2.74□□□□□ -1.97
Lima1Q9ERG0 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Gm29553-201ENSMUST00000189692 279 ntBASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Gm42516-201ENSMUST00000198691 767 ntBASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Gm43967-201ENSMUST00000203787 301 ntBASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Gm45316-201ENSMUST00000210128 162 ntBASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC2.74□□□□□ -1.97
Lima1Q9ERG0 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Gm9370-201ENSMUST00000222787 609 ntBASIC2.74□□□□□ -1.97
Lima1Q9ERG0 AC164883.9-201ENSMUST00000228042 399 ntBASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Gm6030-201ENSMUST00000078768 402 ntBASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Lima1Q9ERG0 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Gm25466-201ENSMUST00000103995 132 ntBASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Gm12042-201ENSMUST00000120479 301 ntBASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Gm13676-201ENSMUST00000122185 591 ntBASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Gm13131-201ENSMUST00000122228 321 ntBASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Gm9785-202ENSMUST00000144563 593 ntBASIC2.73□□□□□ -1.97
Lima1Q9ERG0 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Gm9931-201ENSMUST00000193584 1185 ntBASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Gm44727-201ENSMUST00000204225 451 ntBASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Lima1Q9ERG0 AC134254.5-201ENSMUST00000223436 400 ntBASIC2.73□□□□□ -1.97
Lima1Q9ERG0 AC163664.1-201ENSMUST00000226251 1248 ntBASIC2.73□□□□□ -1.97
Lima1Q9ERG0 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.73□□□□□ -1.97
Lima1Q9ERG0 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
Lima1Q9ERG0 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Gm25308-201ENSMUST00000104171 158 ntBASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Gm22019-201ENSMUST00000104359 96 ntBASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Gm13504-201ENSMUST00000117490 316 ntBASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Gm11708-201ENSMUST00000119530 832 ntBASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Gm7071-201ENSMUST00000120458 462 ntBASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Gm25945-201ENSMUST00000122484 135 ntBASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Gm24876-201ENSMUST00000158780 92 ntBASIC2.72□□□□□ -1.97
Lima1Q9ERG0 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Gm27608-201ENSMUST00000184822 162 ntBASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Gm29597-201ENSMUST00000188035 308 ntBASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Gm19641-201ENSMUST00000188432 417 ntBASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Gm37866-201ENSMUST00000191950 696 ntBASIC2.72□□□□□ -1.97
Lima1Q9ERG0 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Gm43478-201ENSMUST00000200381 292 ntBASIC2.72□□□□□ -1.97
Lima1Q9ERG0 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms