Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 AC115891.1-201ENSMUST00000215798 1755 ntBASIC3.19□□□□□ -1.9
Cpsf1Q9EPU4 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC3.19□□□□□ -1.9
Cpsf1Q9EPU4 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Cpsf1Q9EPU4 Gm15536-201ENSMUST00000121411 114 ntBASIC3.19□□□□□ -1.9
Cpsf1Q9EPU4 Gm23980-201ENSMUST00000157135 158 ntBASIC3.19□□□□□ -1.9
Cpsf1Q9EPU4 Gm23230-201ENSMUST00000157298 133 ntBASIC3.19□□□□□ -1.9
Cpsf1Q9EPU4 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.19□□□□□ -1.9
Cpsf1Q9EPU4 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC3.19□□□□□ -1.9
Cpsf1Q9EPU4 Gm8679-201ENSMUST00000210651 1036 ntBASIC3.19□□□□□ -1.9
Cpsf1Q9EPU4 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Cpsf1Q9EPU4 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Cpsf1Q9EPU4 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Cpsf1Q9EPU4 Gm23377-201ENSMUST00000082943 126 ntBASIC3.19□□□□□ -1.9
Cpsf1Q9EPU4 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Cpsf1Q9EPU4 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 Gm10997-201ENSMUST00000210294 1500 ntBASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 Gm8807-201ENSMUST00000179328 492 ntBASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 Olfr790-204ENSMUST00000218901 1070 ntBASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 Gm9818-201ENSMUST00000050900 255 ntBASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Cpsf1Q9EPU4 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Cpsf1Q9EPU4 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Cpsf1Q9EPU4 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Cpsf1Q9EPU4 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Cpsf1Q9EPU4 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Cpsf1Q9EPU4 Gm14794-201ENSMUST00000118181 192 ntBASIC3.17□□□□□ -1.9
Cpsf1Q9EPU4 Gm7209-201ENSMUST00000122339 333 ntBASIC3.17□□□□□ -1.9
Cpsf1Q9EPU4 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Cpsf1Q9EPU4 Gm23048-201ENSMUST00000157237 129 ntBASIC3.17□□□□□ -1.9
Cpsf1Q9EPU4 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC3.17□□□□□ -1.9
Cpsf1Q9EPU4 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC3.17□□□□□ -1.9
Cpsf1Q9EPU4 Gm43083-201ENSMUST00000199594 476 ntBASIC3.17□□□□□ -1.9
Cpsf1Q9EPU4 Gm19252-201ENSMUST00000204705 305 ntBASIC3.17□□□□□ -1.9
Cpsf1Q9EPU4 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC3.17□□□□□ -1.9
Cpsf1Q9EPU4 AC129308.2-201ENSMUST00000224588 789 ntBASIC3.17□□□□□ -1.9
Cpsf1Q9EPU4 AC127578.1-201ENSMUST00000227289 93 ntBASIC3.17□□□□□ -1.9
Cpsf1Q9EPU4 BC055308-201ENSMUST00000193380 2538 ntBASIC3.17□□□□□ -1.9
Cpsf1Q9EPU4 Gm45558-201ENSMUST00000209384 1895 ntBASIC3.16□□□□□ -1.9
Cpsf1Q9EPU4 Mir592-201ENSMUST00000102113 96 ntBASIC3.16□□□□□ -1.9
Cpsf1Q9EPU4 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Cpsf1Q9EPU4 Gm13614-201ENSMUST00000117306 503 ntBASIC3.16□□□□□ -1.9
Cpsf1Q9EPU4 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC3.16□□□□□ -1.9
Cpsf1Q9EPU4 Gm25910-201ENSMUST00000157620 140 ntBASIC3.16□□□□□ -1.9
Cpsf1Q9EPU4 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC3.16□□□□□ -1.9
Cpsf1Q9EPU4 Mir8118-201ENSMUST00000183962 129 ntBASIC3.16□□□□□ -1.9
Cpsf1Q9EPU4 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC3.16□□□□□ -1.9
Cpsf1Q9EPU4 AC073947.1-201ENSMUST00000216991 649 ntBASIC3.16□□□□□ -1.9
Cpsf1Q9EPU4 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Cpsf1Q9EPU4 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC3.16□□□□□ -1.9
Cpsf1Q9EPU4 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Cpsf1Q9EPU4 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
Cpsf1Q9EPU4 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.16□□□□□ -1.9
Cpsf1Q9EPU4 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.16□□□□□ -1.9
Cpsf1Q9EPU4 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
Cpsf1Q9EPU4 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
Cpsf1Q9EPU4 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Cpsf1Q9EPU4 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cpsf1Q9EPU4 Gm13728-201ENSMUST00000117471 400 ntBASIC3.15□□□□□ -1.91
Cpsf1Q9EPU4 Gm12782-201ENSMUST00000117519 727 ntBASIC3.15□□□□□ -1.91
Cpsf1Q9EPU4 Gm12941-201ENSMUST00000117934 220 ntBASIC3.15□□□□□ -1.91
Cpsf1Q9EPU4 Gm5384-201ENSMUST00000120313 463 ntBASIC3.15□□□□□ -1.91
Cpsf1Q9EPU4 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.15□□□□□ -1.91
Cpsf1Q9EPU4 Gm22264-201ENSMUST00000178200 107 ntBASIC3.15□□□□□ -1.91
Cpsf1Q9EPU4 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Cpsf1Q9EPU4 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cpsf1Q9EPU4 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Cpsf1Q9EPU4 Gm43373-201ENSMUST00000202552 2870 ntBASIC3.15□□□□□ -1.91
Cpsf1Q9EPU4 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Cpsf1Q9EPU4 Gm25377-201ENSMUST00000104334 129 ntBASIC3.14□□□□□ -1.91
Cpsf1Q9EPU4 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.14□□□□□ -1.91
Cpsf1Q9EPU4 n-R5s164-201ENSMUST00000122664 112 ntBASIC3.14□□□□□ -1.91
Cpsf1Q9EPU4 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.14□□□□□ -1.91
Cpsf1Q9EPU4 Gm24475-201ENSMUST00000157435 143 ntBASIC3.14□□□□□ -1.91
Cpsf1Q9EPU4 Gm22947-201ENSMUST00000158559 91 ntBASIC3.14□□□□□ -1.91
Cpsf1Q9EPU4 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC3.14□□□□□ -1.91
Cpsf1Q9EPU4 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC3.14□□□□□ -1.91
Cpsf1Q9EPU4 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC3.14□□□□□ -1.91
Cpsf1Q9EPU4 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Cpsf1Q9EPU4 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Cpsf1Q9EPU4 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC3.14□□□□□ -1.91
Cpsf1Q9EPU4 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cpsf1Q9EPU4 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC3.13□□□□□ -1.91
Cpsf1Q9EPU4 Gm6501-201ENSMUST00000187178 916 ntBASIC3.13□□□□□ -1.91
Cpsf1Q9EPU4 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 112.4 ms