Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Upf1Q9EPU0 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Upf1Q9EPU0 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Upf1Q9EPU0 Gm9059-201ENSMUST00000118319 183 ntBASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Gm15493-201ENSMUST00000119461 528 ntBASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Gm14765-201ENSMUST00000121954 326 ntBASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Gm8200-201ENSMUST00000122390 222 ntBASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Gm7925-201ENSMUST00000166690 401 ntBASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Gm23523-201ENSMUST00000180190 107 ntBASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Gm44016-201ENSMUST00000203463 164 ntBASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Gm45245-201ENSMUST00000210082 376 ntBASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Gm17990-201ENSMUST00000211728 553 ntBASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Gm23443-201ENSMUST00000082916 128 ntBASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Gm26107-201ENSMUST00000083972 107 ntBASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Gm38091-201ENSMUST00000192418 3871 ntBASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Upf1Q9EPU0 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Gm12765-201ENSMUST00000117273 615 ntBASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Gm12039-201ENSMUST00000118219 180 ntBASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Gm9078-201ENSMUST00000119126 617 ntBASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Gm11904-201ENSMUST00000120562 248 ntBASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Gm12872-201ENSMUST00000121835 320 ntBASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Gm24371-201ENSMUST00000122662 267 ntBASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Upf1Q9EPU0 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Gm22320-201ENSMUST00000157149 312 ntBASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Gm24240-201ENSMUST00000157785 135 ntBASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Gm24857-201ENSMUST00000158061 310 ntBASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Gm24546-201ENSMUST00000158652 102 ntBASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Gm28625-201ENSMUST00000188309 205 ntBASIC5.14□□□□□ -1.59
Upf1Q9EPU0 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Gm37343-201ENSMUST00000192542 111 ntBASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC5.14□□□□□ -1.59
Upf1Q9EPU0 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Upf1Q9EPU0 AC123618.1-201ENSMUST00000220174 360 ntBASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC5.14□□□□□ -1.59
Upf1Q9EPU0 AC121898.1-201ENSMUST00000227599 288 ntBASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Gm23645-201ENSMUST00000083228 108 ntBASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC5.14□□□□□ -1.59
Upf1Q9EPU0 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Upf1Q9EPU0 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC5.14□□□□□ -1.59
Upf1Q9EPU0 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 AC160130.1-201ENSMUST00000220734 2735 ntBASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Gm24951-201ENSMUST00000102182 109 ntBASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Gm12255-201ENSMUST00000117184 284 ntBASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Gm14831-201ENSMUST00000120253 409 ntBASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Gm4222-201ENSMUST00000165784 470 ntBASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Gm23191-201ENSMUST00000179147 107 ntBASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Gm22633-201ENSMUST00000179834 107 ntBASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Gm37692-201ENSMUST00000192633 232 ntBASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Gm37732-201ENSMUST00000194377 316 ntBASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 AC160016.1-201ENSMUST00000215589 448 ntBASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Gm46194-201ENSMUST00000218136 320 ntBASIC5.13□□□□□ -1.59
Upf1Q9EPU0 CT025606.1-201ENSMUST00000218273 324 ntBASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Gm8249-201ENSMUST00000219225 465 ntBASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Gm29774-201ENSMUST00000219270 436 ntBASIC5.13□□□□□ -1.59
Upf1Q9EPU0 AC134254.5-201ENSMUST00000223436 400 ntBASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 AC154506.1-201ENSMUST00000225178 621 ntBASIC5.13□□□□□ -1.59
Upf1Q9EPU0 AC112935.1-201ENSMUST00000227603 250 ntBASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms