Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm8041-201ENSMUST00000199755 616 ntBASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm18672-201ENSMUST00000208035 270 ntBASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 AC172751.1-201ENSMUST00000226887 440 ntBASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm23741-201ENSMUST00000097237 171 ntBASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Gm37645-201ENSMUST00000194285 3556 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Gm23256-201ENSMUST00000102235 110 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Gm26140-201ENSMUST00000103807 110 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Gm24788-201ENSMUST00000104283 156 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Gm12053-201ENSMUST00000119022 252 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Gm14804-201ENSMUST00000122322 508 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Gm15077-201ENSMUST00000122344 362 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Gm26312-201ENSMUST00000157769 165 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Gm9071-201ENSMUST00000165915 474 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Gm22908-201ENSMUST00000177620 110 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Gm19244-201ENSMUST00000204340 253 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Gm8125-201ENSMUST00000216602 738 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 AC116589.7-201ENSMUST00000221061 239 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 AC164117.1-201ENSMUST00000221726 239 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 CT010480.1-201ENSMUST00000223612 363 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Gm22572-201ENSMUST00000082985 105 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Mir21a-201ENSMUST00000083521 92 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 AC163660.3-201ENSMUST00000224253 1563 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Gm42909-201ENSMUST00000196982 3619 ntBASIC4.44□□□□□ -1.7
Ddx56Q9D0R4 Gm21035-201ENSMUST00000207867 2608 ntBASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Gm43404-201ENSMUST00000200424 2534 ntBASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Gm12492-201ENSMUST00000117665 564 ntBASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Gm15212-201ENSMUST00000122403 466 ntBASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Gm32340-201ENSMUST00000192883 259 ntBASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Gm42830-201ENSMUST00000196642 313 ntBASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Gm19147-201ENSMUST00000199622 652 ntBASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Gm8132-201ENSMUST00000204938 640 ntBASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Gm44961-201ENSMUST00000207450 196 ntBASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Gm18774-201ENSMUST00000218269 601 ntBASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Gm9818-201ENSMUST00000050900 255 ntBASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Gm22245-201ENSMUST00000082479 103 ntBASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Gm24268-201ENSMUST00000082990 110 ntBASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Ddx56Q9D0R4 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 Gm23782-201ENSMUST00000157939 120 ntBASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 Igkv17-134-201ENSMUST00000168310 348 ntBASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 Gm23144-201ENSMUST00000180226 107 ntBASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 Gm6802-202ENSMUST00000186566 126 ntBASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 Gm19503-201ENSMUST00000187109 241 ntBASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 Gm29428-201ENSMUST00000190086 409 ntBASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 Gm44032-201ENSMUST00000204841 166 ntBASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 Gm44703-201ENSMUST00000205724 248 ntBASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 AL450317.1-201ENSMUST00000213941 291 ntBASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 Gm4921-201ENSMUST00000219804 992 ntBASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 Gm23099-201ENSMUST00000083454 139 ntBASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 Gm7381-201ENSMUST00000098958 300 ntBASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms